Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq30197 181 1e-40 seq11258 143 3e-29 seq22621 141 1e-28 seq41103 104 3e-17 seq37018 86.0 8e-12 >seq30197 Length=39373 Score = 181 bits (200), Expect = 1e-40 Identities = 366/541 (68%), Gaps = 4/541 (1%) Strand=Plus/Plus Query 195866 AATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAA 195925 ||||| | |||||||| || || ||||| || |||||||| || |||| | ||||||| Sbjct 25029 AATGTTCTCATCTTTGACCTTGGAGGTGGCACCTTTGATGTGTCCATTCTGACTATTGAA 25088 Query 195926 GGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTC 195985 | ||||| ||||| || || | ||||| ||||| || || | ||||| ||||| ||| Sbjct 25089 GACGGTATCTTCGAGGTGAAATCCACTGCAGGTGACACCCACTTGGGTGGAGAAGACTTC 25148 Query 195986 GATGCACGTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATT 196045 || || | | || || || |||||| || ||| | ||||| || || Sbjct 25149 GACAACCGCATGGTGAACCACTTCATTGCCGAGTTCAAGCGCAAGCACAAGAAGGACATC 25208 Query 196046 TCTGGAAATCCTAGGGCTC--TTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAA 196103 | ||| | || || | ||||||| || | ||||| || || |||||||| || | Sbjct 25209 AGCGAAAA--CAAGCGCGCAGTTCGTCGCCTCCGCACTGCGTGCGAGCGTGCCAAGCGTA 25266 Query 196104 CTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACT 196163 |||| ||||||| | || | | |||||||||| || | | || || ||||||| Sbjct 25267 CTCTGTCTTCTAGCACGCAGGCCAGTATTGAGATTGACTCTCTCTACGAGGGCATTGACT 25326 Query 196164 TCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGT 196223 |||| ||| | || ||| | || || ||||||||| | || |||| |||| | Sbjct 25327 TCTACACATCCATCACCAGAGCTCGCTTTGAAGAGCTGAATGCTGACCTGTTCCGTGGCA 25386 Query 196224 GTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATG 196283 |||| || || || | | || || || || ||| | || ||||| || | ||| Sbjct 25387 CCCTGGATCCAGTGGAGAAGGCTCTGCGGGATGCCAAGCTCGACAAGTCCCAGATCCATG 25446 Query 196284 AAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCT 196343 | ||||| || || || || || || ||||| || |||||||| | |||| | Sbjct 25447 ACATTGTGCTGGTTGGTGGCTCTACTCGTATCCCAAAGATTCAGAAACTGCTGCAGGATT 25506 Query 196344 TCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTG 196403 |||||||| ||||| | ||||| | ||||| || ||||| || || ||||| |||| Sbjct 25507 TCTTCAATGGCAAAGAGCTGAACAAGAGCATCAATCCTGATGAGGCTGTGGCTTACGGTG 25566 Query 196404 C 196404 | Sbjct 25567 C 25567 Score = 107 bits (118), Expect = 3e-18 Identities = 111/143 (78%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 195708 ATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACG 195767 |||| || |||||||| || || || |||| ||||| || || ||||| || || || | Sbjct 24768 ATGCTGTAGTGACTGTCCCAGCCTATTTCAACGATTCTCAGCGTCAGGCTACGAAAGATG 24827 Query 195768 CTGCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCA 195826 ||| | ||||| || || || |||| | ||||||||||||| || ||||| |||||| Sbjct 24828 CTGGAACCATTGCAGGGCTCAA-TGTCCTGCGAATTATCAATGAGCCGACAGCTGCTGCA 24886 Query 195827 ATTGCTTATGGTCTGGACAAGAA 195849 || || ||||||||||| ||||| Sbjct 24887 ATAGCCTATGGTCTGGATAAGAA 24909 Score = 89.7 bits (98), Expect = 7e-13 Identities = 142/201 (71%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 196610 GTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGATTT 196668 |||||||| |||||||| | || || | || || ||| | | || || | ||||| | Sbjct 26415 GTATATGAGGGAGAACG-TGCCATGACTAAAGACAACAACTTGCTGGGCAAGTTCGAGCT 26473 Query 196669 GACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGA 196728 ||| || || || |||| ||||||||||| || |||||| | || ||| ||||| || Sbjct 26474 GACTGGTATCCCCCCTGCTCCCAGAGGTGTACCTCAGATTGAAGTAACCTTTGATATTGA 26533 Query 196729 CGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGAT 196788 || ||||| || || ||||| | |||| ||| ||| ||||||| | ||||| Sbjct 26534 TGCCAATGGCATCCTGAACGTGTCTGCTGTGGATAAGAGCACTGGCAAGGAGAACAAGAT 26593 Query 196789 TGTGATTACCAATGACAAGGG 196809 || || ||||||||||| Sbjct 26594 CACAATCACGAATGACAAGGG 26614 >seq11258 Length=1071 Score = 143 bits (158), Expect = 3e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| ||||| || || |||||||| ||||| ||| | Sbjct 35 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 94 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | || |||||||| || || ||||| |||||||| || || ||| Sbjct 95 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAG 154 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | | || || ||||| || ||||| || ||||| || ||||| | || |||||| Sbjct 155 CAGAGGTTGATCTTCGCTGGCAAGCAGCTGGAGGATGGGCGCACCCTGTCCGACTACAAC 214 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || ||||| || || || || ||||| || Sbjct 215 ATCCAGAAGGAATCCACCCTCCATCTTGTGCT 246 >seq22621 Length=30986 Score = 141 bits (156), Expect = 1e-28 Identities = 602/956 (63%), Gaps = 59/956 (6%) Strand=Plus/Plus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || || || ||||| | || || || ||||| || || ||||| | || ||| Sbjct 3652 GCAATCGGCATCGACCTGGGCACCACGTACTCTTGCGTGGGTGTCTTCCAGCATGGCAAA 3711 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || ||||| || | || |||||||| ||||| || || || || || ||||| || Sbjct 3712 GTGGAGATCATTGCCAACGACCAAGGGAACCGCACCACACCCAGCTATGTGGCCTTCACT 3771 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 |||| || || ||| | || ||||| || || || ||| ||||||||||||| ||| Sbjct 3772 GATACAGAGCGCCTCATCGGTGATGCAGCCAAGAACCAGGTGGCTATGAACCCTACCAAC 3831 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || ||||||| || |||||||| || || ||||||| | || | || || | Sbjct 3832 ACCATCTTTGATGCTAAGCGTCTCATCGGCCGCAAGTATGATGACCCTACGGTGCAGTCC 3891 Query 195539 GATATAAAGGACTGGTCTT------------ATGA-AGTTG--TTCCCGGTGTGGCTGAT 195583 ||||| ||| ||||| | | |||| ||| | ||| ||| |||| Sbjct 3892 GATATGAAGCACTGGCCCTTCCGTGTGGTGAATGATAGTGGCAAGCCCAAGGTGAATGAT 3951 Query 195584 ------AAGCCTATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCC-GA 195636 ||||| | | | | || || | | ||||||| | || | ||| |||| || Sbjct 3952 AGTGGCAAGCCCAAGGTGCAAGTGGAGTACAAGGGTGAGATG-AAGACTTTCTTCCCAGA 4010 Query 195637 AGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAA 195696 || || |||||||| | | ||||||||||||| ||| || | | |||| Sbjct 4011 GGAGATCAGCTCTATGGTCCTAACCAAGATGAAGGAGATTGCTGAGGCCTATCTGGGGCG 4070 Query 195697 AACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGA--------------- 195741 | ||| | |||| || | || || ||||||||||||| ||| Sbjct 4071 CAAAGTGCAGAATGCCGTCATTACAGTGCCTGCTTACTTCAATGANNNNNNNNNNNNNNN 4130 Query 195742 -----------TTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAAC 195790 ||||| || || || |||| | || | || || || Sbjct 4131 NNNNNNNNNNNNNNNNNNNNNCAGGCCACCAAAGATGCTGGCACCATCACTGGCCTTAA- 4189 Query 195791 TGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAA 195849 ||| | | ||||||||||| || ||||| ||||| || || ||||| |||||||||| Sbjct 4190 TGTGATGCGTATTATCAATGAGCCCACAGCAGCTGCTATAGCCTATGGCTTGGACAAGAA 4249 Query 195850 CAAGGAC-------GAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTG 195902 | | || | || || ||||| | || ||||| | || || ||||| |||| Sbjct 4250 -AGGTACTCGAGCTGGTGAGAAGAATGTGCTCATATTTGACTTGGGAGGGGGTACTTTTG 4308 Query 195903 ATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATA 195962 |||| || | || | ||||| | ||| || || || || ||| | || |||||||| | Sbjct 4309 ATGTGTCCATACTTACCATTGAGGATGGAATCTTTGAGGTGAAGTCCACAGCTGGTGACA 4368 Query 195963 CTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTGATGAGTTCC 196022 | ||||| ||||| || || || || ||| | | ||||| || || ||| Sbjct 4369 CCCATCTGGGTGGGGAGGACTTTGACAACCGTATGGTGAACCATTTTGTGGAAGAATTCA 4428 Query 196023 GTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTG 196082 || ||| | ||| || || ||| || | || | || ||||| | || | Sbjct 4429 AGCGTAAGCACAAGCGTGACATCGGTGGCAACAAGCGAGCAGTGCGGCGGCTGCGTACAG 4488 Query 196083 CATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATT 196142 | ||||| | || || || || ||| ||| | | ||| | | |||||||||| | Sbjct 4489 CTTGTGAGAGGGCAAAGCGCACCCTCAGCTCTTCCACACAAGCTAGCATTGAGATTGACT 4548 Query 196143 CGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAG 196198 | | || || || ||||||||||| || | ||||||||||| || ||||| ||| Sbjct 4549 CCCTCTTCGAGGGTATTGACTTCTACACCTCCATTACCCGTGCCCGCTTTGAGGAG 4604 Score = 109 bits (120), Expect = 7e-19 Identities = 152/210 (72%), Gaps = 6/210 (3%) Strand=Plus/Plus Query 196312 TATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAAC 196371 |||||| ||||| ||| || |||| |||||||||| ||||| | ||||| | Sbjct 4615 TATTCCCAAGATCCAAAAGCTGCTACAGGACTTCTTCAATGGCAAAGAGCTCAACAAGAG 4674 Query 196372 GATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGG 196431 |||||||| ||||| || |||||||||||||| || || || || || || |||| | Sbjct 4675 CATCAACCCCGATGAGGCTGTTGCTTATGGTGCTGCTGTGCAAGCAGCAAT--CCTCATG 4732 Query 196432 TGTTGACAA---TAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCT 196488 | ||||| | | ||||| || ||||| ||||| | ||||| | || | ||||| Sbjct 4733 -GGAGACAAGTCTGAGAACGTGCAGGATCTGCTGCTGTTGGATGTCACCCCTCTGTCCCT 4791 Query 196489 GGGTCTTGAAACAGCGGGTGGTGTTATGAC 196518 ||| |||| ||||| ||||| || ||||| Sbjct 4792 GGGCATTGAGACAGCTGGTGGAGTGATGAC 4821 >seq41103 Length=7314 Score = 104 bits (114), Expect = 3e-17 Identities = 159/224 (71%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 196637 AAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGT 196696 |||||||| ||||| || |||||||||||| | || || || || |||| || | ||| Sbjct 4601 AAGGATAATCATCTTCTGGGAACTTTCGATCTCACTGGAATCCCTCCTGCCCCTCGTGGT 4542 Query 196697 GTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCT 196756 || || |||||| | ||| ||| || ||||| | |||||||| || ||||| ||| Sbjct 4541 GTCCCCCAGATTGAAGTTACCTTTGAGATAGATGTGAATGGAATCCTCCGTGTCACGGCT 4482 Query 196757 GAGGACAAGGCTTCTGGCAAATCTGAA-AAGATTGTGATTACCAATGACAAGGGGCGGCT 196815 |||||||||| | || ||| ||| ||||| |||||| ||||| || ||||| Sbjct 4481 GAGGACAAGGGCACCGG-GAATAAGAACAAGATCACGATTACAAATGATCAGAACCGGCT 4423 Query 196816 TTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGT 196859 | || || ||||| | ||||| | ||||| || |||| Sbjct 4422 CACACCAGAAGAGATTGAGAGGATGGTGAATGATGCTGAGAAGT 4379 Score = 100 bits (110), Expect = 4e-16 Identities = 127/174 (73%), Gaps = 3/174 (2%) Strand=Plus/Minus Query 195814 AACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATT 195873 |||||| ||||| ||||||||||| ||||||||| ||| || || ||| | | Sbjct 6246 AACAGCTGCTGCCATTGCTTATGGATTGGACAAGAGAGAGGGTGAG---AAGAATATCCT 6190 Query 195874 GATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTAT 195933 | ||||| | |||||||| || ||||||||||| || |||| ||||| ||| | Sbjct 6189 CGTGTTTGACTTGGGTGGTGGAACTTTTGATGTCTCCCTCCTCACCATTGATAATGGAGT 6130 Query 195934 ATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || ||||| ||||||| |||||| ||||| || ||||| ||||| || || Sbjct 6129 CTTTGAAGTCGTGGCTACTAATGGTGACACTCACCTGGGTGGAGAAGACTTTGA 6076 >seq37018 Length=4169 Score = 86.0 bits (94), Expect = 8e-12 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022 ||||||||| || || ||||| ||||| || |||||||| || ||||| ||||||||||| Sbjct 643 AGGCATTCCTCCTGACCAGCAGCGACTGATCTTTGCTGGAAAGCAGCTCGAAGATGGACG 702 Query 172023 TACCCTCGCTGATTACAACGTTCAAAA 172049 || || |||| |||||| | ||||| Sbjct 703 CACGCTGTCTGACTACAACATCCAAAA 729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 656277033848800