Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq8761 197 2e-44 seq29259 178 2e-38 seq182542 161 2e-33 seq170293 145 1e-28 seq35192 129 9e-24 seq135846 116 6e-20 seq88840 116 6e-20 seq140883 105 1e-16 >seq8761 Length=2590 Score = 197 bits (218), Expect = 2e-44 Identities = 190/244 (78%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| ||||| |||||| ||||||| || || ||| Sbjct 1792 TGTACTTGGTGACAGCCTTGGTGCCCTCGGAGACTGCGTGCTTGGCCAGCTCACCCGGCA 1851 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || |||||||| ||||||||||| || | ||| || ||||||||| | Sbjct 1852 GCAAAAGCCGCACGGCTGTCTGGATCTCCCGAGAAGTGATGGTAGAGCGCTTGTTGTAGT 1911 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| ||||||| | ||||||| |||| |||||||||||||| ||||||| Sbjct 1912 GCGCCAGGCGAGAGGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACAAAGGAGTTCA 1971 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| || || ||| |||||||||||||||||| |||||||||| Sbjct 1972 TGATGCCCATAGCCTTGGAAGAAATACCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 2031 Query 1485710 AAAC 1485713 | || Sbjct 2032 ACAC 2035 >seq29259 Length=36405 Score = 178 bits (196), Expect = 2e-38 Identities = 193/256 (75%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||||||||| |||||| ||||||| || || | | Sbjct 31003 TGTACTTGGTGACAGCCTTGGTGCCCTCTGAGACAGCGTGCTTGGCCAGCTCTCCTGGGA 31062 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||||||||| || ||||||||||| |||| | ||| ||| ||||||||| Sbjct 31063 GCAGCAGGCGCACTGCCGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAAT 31122 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||||||| || || ||||||| || | ||||| || || || ||||||| Sbjct 31123 GGGCCAGGCGAGACGCTTCTCCAGCGATGCGCTCAAAGATGTCATTAACGAAGGAGTTCA 31182 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| ||| ||||||||| ||| ||||| |||||||| |||||||||| Sbjct 31183 TGATGCCCATCGCCTTGGAGGAGATGCCGGTGTCAGGGTGGACCTGCTTCAGCACCTTGT 31242 Query 1485710 AAACAAAGGACGAGTA 1485725 | ||| || ||||| Sbjct 31243 AGACATAGATGGAGTA 31258 >seq182542 Length=5291 Score = 161 bits (178), Expect = 2e-33 Identities = 198/269 (74%), Gaps = 1/269 (0%) Strand=Plus/Minus Query 1485446 CCGCGGCGGCGTTGATGGCATC-GTTGTACTTGGTGACGGCCTTGGTACCCTCTGAGACG 1485504 |||| || ||||| | | | | | |||| |||||||| |||||||| ||||| || ||| Sbjct 2362 CCGCAGCCGCGTTACTTGGAGCTGGTGTATTTGGTGACCGCCTTGGTGCCCTCGGACACG 2303 Query 1485505 GCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTG 1485564 ||||| | ||||| |||||| ||| | ||| | |||||| ||||||||||| | | Sbjct 2302 GCGTGTTTAGCCAGCTCGCCGGGCAGCAGCAGCCTCACGGCCGTCTGGATCTCCCTCGAA 2243 Query 1485565 CCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCG 1485624 ||| ||| ||||||||| | |||||| ||| || || | ||||||| ||| Sbjct 2242 GTGATGGTGGAGCGCTTGTTGTAGTGCGCCAAGCGCGACGCTTCCCCGGCGATGCGCTCG 2183 Query 1485625 ATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCG 1485684 | ||||||||||| || ||||||||||| ||| | || ||| ||||| ||| Sbjct 2182 AAGATGTCGTTGACGAAGGAGTTCATGATACCCATGGCCTTAGAGGAAATGCCGGTGTCC 2123 Query 1485685 GGGTGCACCTGCTTGAGCACCTTGTAAAC 1485713 ||||| |||||||| ||||||||||| || Sbjct 2122 GGGTGGACCTGCTTCAGCACCTTGTACAC 2094 >seq170293 Length=2557 Score = 145 bits (160), Expect = 1e-28 Identities = 155/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 1485509 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGA 1485568 || ||||||| || || ||| | || |||||||| ||||||||||| || | | || Sbjct 1839 GCTTGGCCAGCTCACCTGGCAGCAGGAGCCGCACGGCCGTCTGGATCTCCCGAGAGGTGA 1898 Query 1485569 TCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1485628 | ||| ||||||||| | |||||||||| ||||||| ||||||| |||| | Sbjct 1899 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCAGCGATGCGCTCGAAAA 1958 Query 1485629 TGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGT 1485688 ||||||| || || ||||||||||| ||| | ||| ||||||||| |||||||| Sbjct 1959 TGTCGTTAACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 2018 Query 1485689 GCACCTGCTTGAGCACCTTGTAAAC 1485713 |||||||||| || |||||||| || Sbjct 2019 GCACCTGCTTCAGTACCTTGTACAC 2043 >seq35192 Length=28834 Score = 129 bits (142), Expect = 9e-24 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| ||||| || ||| ||||||| || || ||| Sbjct 17129 TGTACTTGGTGACAGCCTTGGTGCCCTCAGAGACAGCATGCTTGGCCAGCTCACCAGGCA 17188 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || |||||||| ||||| | ||| ||| || ||| ||| ||| || | || | Sbjct 17189 GCAGGAGCCGCACGGCCGTCTGCACCTCCCGGCTGGTGATGGTGGAGCG-GTGATTGTAC 17247 Query 1485590 -GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 | |||||||| |||||| | | | | || || | || || |||||||| |||||| Sbjct 17248 TGGGCCAGGCGAGAGGCCTCCGAGGCCAGACGTTCAAACAGATCATTGACAAAGGAGTTC 17307 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGC 1485696 ||||| ||| | || ||||||||| ||| |||||||||||| Sbjct 17308 ATGATGCTCATGGCCTTAGAGGAGATGCCAGTGTCCGGGTGCACCTGC 17355 >seq135846 Length=9076 Score = 116 bits (128), Expect = 6e-20 Identities = 127/169 (75%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 1485549 CTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCCGGCCTC 1485608 ||||||||| || | ||| || ||| ||||| ||||||||||| || || Sbjct 4929 CTGGATCTCCCGAGAAGTGATGGTAGAGCGTTTGTTGTAATGCGCCAGGCGGGAAGCTTC 4870 Query 1485609 GGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTT 1485668 | | ||||||| |||| ||||||||||| || ||||||||||| ||| | ||| Sbjct 4869 GCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCATGATGCCCATAGCCTTGGA 4810 Query 1485669 GGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAACAAAG 1485717 ||||||||| |||||||||||||||||| ||||||||||| ||| || Sbjct 4809 CGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGTACACATAG 4761 >seq88840 Length=1052 Score = 116 bits (128), Expect = 6e-20 Identities = 121/159 (76%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 1485567 GATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGAT 1485626 ||| ||| ||||||||| |||||||||| ||||||| | ||||||| |||| Sbjct 1050 GATGGTGGAGCGCTTGTTGTAATGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAA 991 Query 1485627 CATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGG 1485686 |||||||| || || ||||||||||| ||| | ||| ||||||||| |||||| Sbjct 990 GATGTCGTTAACGAAGGAGTTCATGATGCTCATGGCCTTGGACGAGATGCCCGTGTCGGG 931 Query 1485687 GTGCACCTGCTTGAGCACCTTGTAAACAAAGGACGAGTA 1485725 |||||||||||| || |||||||| || || |||||| Sbjct 930 GTGCACCTGCTTCAGTACCTTGTACACGTAGATCGAGTA 892 >seq140883 Length=29395 Score = 105 bits (116), Expect = 1e-16 Identities = 114/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 1485567 GATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGAT 1485626 ||| ||| ||||||||| | |||||||||| ||||||| | ||||||| |||| Sbjct 7992 GATGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAA 7933 Query 1485627 CATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGG 1485686 |||||||| || || ||||||||||| ||| | || ||||| ||| |||||| Sbjct 7932 GATGTCGTTAACGAAGGAGTTCATGATGCCCATGGCCTTTGACGAGATACCCGTGTCGGG 7873 Query 1485687 GTGCACCTGCTTGAGCACCTTGTAAACAAAG 1485717 |||||||||||| | ||| ||||| ||| || Sbjct 7872 GTGCACCTGCTTCAACACTTTGTACACATAG 7842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7895738448384810