Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq137757 102 6e-16 seq22621 87.8 1e-11 >seq137757 Length=27055 Score = 102 bits (112), Expect = 6e-16 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 131176 TGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTAT 131235 ||| ||||| ||| | |||||||| ||||| || |||||| | ||| | | | ||||| Sbjct 12304 TGTTGTAGCTACAGTGGCATTTGGAATGGGCATCAATAAAGCAGATATCCGGATGGTTAT 12363 Query 131236 TCATTACGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCG 131295 |||||| || || || ||| | || ||| ||||| ||||||||||| ||||| ||||| Sbjct 12364 TCATTATGGTGCCCCTAAGGAAATGGAATCCTATTACCAAGAAATTGGGAGAGCTGGTCG 12423 Query 131296 TGATGG 131301 |||||| Sbjct 12424 TGATGG 12429 >seq22621 Length=30986 Score = 87.8 bits (96), Expect = 1e-11 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282620 AATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAAT 282679 || ||||| | |||||||| || || || | |||||| | | | | || || | Sbjct 3911 AAGGGCCAGTGCTTCATATCGGACTGCACCGTAGGGTCATCATACTTGCGGCCGATGAGA 3852 Query 282680 CGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCT 282739 || || |||||||| || || ||||| || || | || | || | ||||||||||| Sbjct 3851 CGCTTAGCATCAAAGATGGTGTTGGTAGGGTTCATAGCCACCTGGTTCTTGGCTGCATCA 3792 Query 282740 CCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGA 282799 || || || | ||||| || || || | ||||| || || ||||| || ||||| Sbjct 3791 CCGATGAGGCGCTCTGTATCAGTGAAGGCCACATAGCTGGGTGTGGTGCGGTTCCCTTGG 3732 Query 282800 TCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAA 282847 || || ||||| || || ||||| |||| || | ||||| || ||| Sbjct 3731 TCGTTGGCAATGATCTCCACTTTGCCATGCTGGAAGACACCCACGCAA 3684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3731165225730540