Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq75926 102 9e-17 >seq75926 Length=1118 Score = 102 bits (112), Expect = 9e-17 Identities = 191/278 (69%), Gaps = 6/278 (2%) Strand=Plus/Plus Query 162655 TTGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTAACGCTG 162714 |||||||| | |||||||| |||| ||||| || || | |||||||| || || Sbjct 154 TTGGTCTTTATTGGAAAGTCCATGCCACAGAGGTTTATTAGGTATTTCCAGTTTGAACTT 213 Query 162715 AGTCCGTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGTAC 162774 || ||| || || | | ||||| | || ||||| || | ||||| || || ||| Sbjct 214 CTTCTGTAGAGGTCTTTCATGCAGTTAATGTCTGCCTGCACTCTGCTCCATGAAGCATAC 273 Query 162775 ACGACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCCATC 162834 || || ||||| ||| | | | | ||||||||| || ||||| || ||||| ||| || Sbjct 274 ACAACACTCTCTAACTGACTAGAAATAAAGACATTATCAAAACATGAGACTATGCCCCTC 333 Query 162835 ACGGCCAGTGAGAACA---TCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTC 162891 || || || | || | || || ||| | || || || | |||||| | |||| Sbjct 334 ACAGC-AGCAAAAAAAGATTCTGGAGACTTTT--TGTCAACATGAATGCAGTAAAAATTC 390 Query 162892 TGAGGGGCGTAGATGGCCCTCAGTAATCTCTCGAACAT 162929 |||||||| ||||| | ||| || | ||| || | ||| Sbjct 391 TGAGGGGCATAGATTGACCTTAGAAGTCTGTCAAGCAT 428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577038051184000