Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq32030 118 3e-23 seq820 118 3e-23 seq155639 98.7 3e-17 seq1453 98.7 3e-17 seq153465 95.1 4e-16 seq167033 91.5 5e-15 >seq32030 Length=10128 Score = 118 bits (130), Expect = 3e-23 Identities = 70/73 (96%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct 6918 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAT 6977 Query 2828 CCCGGGCTTCAGC 2840 ||||||||||||| Sbjct 6978 CCCGGGCTTCAGC 6990 >seq820 Length=9912 Score = 118 bits (130), Expect = 3e-23 Identities = 70/73 (96%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct 3772 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAT 3713 Query 2828 CCCGGGCTTCAGC 2840 ||||||||||||| Sbjct 3712 CCCGGGCTTCAGC 3700 >seq155639 Length=15939 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 6423 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 6364 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 6363 CCGGGTTTCGGC 6352 >seq1453 Length=31673 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 2590 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 2531 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 2530 CCGGGTTTCGGC 2519 >seq153465 Length=6685 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 1050 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATT 1109 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1110 CCGGGTTTCGGC 1121 >seq167033 Length=28818 Score = 91.5 bits (100), Expect = 5e-15 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 2773 AAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 || |||||||||||||||||||||||||||||||||||||||||||||| || | ||| | Sbjct 22987 AAATAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGATCGATCCCAG 23046 Query 2833 GCTTCAGC 2840 | ||| || Sbjct 23047 GTTTCTGC 23054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15816178889550