Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq8761 170 3e-36 seq182542 143 4e-28 seq29259 134 2e-25 seq170293 132 7e-25 seq88840 100 4e-15 seq35192 96.9 5e-14 seq156245 93.3 6e-13 seq135846 93.3 6e-13 seq140883 91.5 2e-12 >seq8761 Length=2590 Score = 170 bits (188), Expect = 3e-36 Identities = 176/229 (77%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || ||| | || | |||| | ||| Sbjct 2032 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC----GGGTATTTCTTC--CAAGGCTATG 1979 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| |||||||||||||| |||| ||||||| | ||||||| |||| Sbjct 1978 GGCATCATGAACTCCTTTGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCTCGC 1919 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| || ||| | || ||||||||||| |||||||| Sbjct 1918 CTGGCGCACTACAACAAGCGCTCTACCATCACTTCTCGGGAGATCCAGACAGCCGTGCGG 1859 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| || || ||||||| |||||| |||||||||||||||| Sbjct 1858 CTTTTGCTGCCGGGTGAGCTGGCCAAGCACGCAGTCTCCGAGGGCACCA 1810 >seq182542 Length=5291 Score = 143 bits (158), Expect = 4e-28 Identities = 170/229 (74%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| ||||| |||| ||| ||| ||| ||||| Sbjct 2097 TACAAGGTGCTGAAGCAGGTCCACCCGGACACCGG-----CATT-TCCTCTAAGGCCATG 2150 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| | || || ||| Sbjct 2151 GGTATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGGGGAAGCGTCGCGC 2210 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 |||||| || |||||||||| ||| ||| || | ||||||||||| |||||| | Sbjct 2211 TTGGCGCACTACAACAAGCGCTCCACCATCACTTCGAGGGAGATCCAGACGGCCGTGAGG 2270 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||| | |||||||| ||||||||||||| Sbjct 2271 CTGCTGCTGCCCGGCGAGCTGGCTAAACACGCCGTGTCCGAGGGCACCA 2319 >seq29259 Length=36405 Score = 134 bits (148), Expect = 2e-25 Identities = 177/244 (73%), Gaps = 6/244 (2%) Strand=Plus/Minus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 ||||| || | ||||||||||||| |||||||| ||||| |||| |||| Sbjct 31258 TACTCCATCTATGTCTACAAGGTGCTGAAGCAGGTCCACCCTGACACCGG-----CATC- 31205 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 ||| |||| | ||| ||||||||||| || || || ||||| | || ||||||| Sbjct 31204 TCCTCCAAGGCGATGGGCATCATGAACTCCTTCGTTAATGACATCTTTGAGCGCATCGCT 31145 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078 || || ||||||||| | | |||||||||| ||| ||| | | || |||||| Sbjct 31144 GGAGAAGCGTCTCGCCTGGCCCATTACAACAAGCGCTCCACCATCACCTCCCGGGAGATC 31085 Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGC 725138 ||||| || ||||||||| | | | || || ||||||| |||||| ||||| |||||| Sbjct 31084 CAGACGGCAGTGCGCCTGCTGCTCCCAGGAGAGCTGGCCAAGCACGCTGTCTCAGAGGGC 31025 Query 725139 ACCA 725142 |||| Sbjct 31024 ACCA 31021 >seq170293 Length=2557 Score = 132 bits (146), Expect = 7e-25 Identities = 155/208 (75%), Gaps = 6/208 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 |||||||| || ||||||||||||||| || || |||| || |||| ||||| Sbjct 2040 TACAAGGTACTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 1987 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || || |||||||| |||| ||||||| ||||||| ||| Sbjct 1986 GGCATCATGAACTCCTTCGTTAACGACATTTTCGAGCGCATCGCTGGCGAGGCCTCGCGC 1927 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | | || ||||||||||| |||||||| Sbjct 1926 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCTCGGGAGATCCAGACGGCCGTGCGG 1867 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGC 725121 || | ||| || || ||||||| || Sbjct 1866 CTCCTGCTGCCAGGTGAGCTGGCCAAGC 1839 >seq88840 Length=1052 Score = 100 bits (110), Expect = 4e-15 Identities = 113/150 (75%), Gaps = 6/150 (4%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 |||||||| || ||||||||||||||| || || |||| || |||| ||||| Sbjct 907 TACAAGGTACTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 960 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || || |||||||| |||| ||||||| | ||||||| ||| Sbjct 961 AGCATCATGAACTCCTTCGTTAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCGCGC 1020 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATC 725063 ||||||| | |||||||||| ||| ||| Sbjct 1021 CTGGCGCATTACAACAAGCGCTCCACCATC 1050 >seq35192 Length=28834 Score = 96.9 bits (106), Expect = 5e-14 Identities = 128/178 (72%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 724965 AAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAG 725024 ||| ||||| ||||||||||| |||||||| || || | || || | | | | ||| Sbjct 17324 AAGGCCATGAGCATCATGAACTCCTTTGTCAATGATCTGTTTGAACGTCTGGCCTCGGAG 17265 Query 725025 GCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACC 725084 ||| ||||||||| | | ||| | ||| ||| ||| || || ||| | ||||| Sbjct 17264 GCCTCTCGCCTGGCCCAGTACAATCACCGCTCCACCATCACCAGCCGGGAGGTGCAGACG 17205 Query 725085 GCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||||||| || | ||| || || ||||||| ||| || ||||| |||||||||| Sbjct 17204 GCCGTGCGGCTCCTGCTGCCTGGTGAGCTGGCCAAGCATGCTGTCTCTGAGGGCACCA 17147 >seq156245 Length=697 Score = 93.3 bits (102), Expect = 6e-13 Identities = 105/139 (76%), Gaps = 4/139 (3%) Strand=Plus/Plus Query 262091 CAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTAC 262150 ||| |||||| |||| | | | | || | ||||| ||||| ||||||||| ||||| Sbjct 221 CAGCTCTGGTACTCCATCATTGAGTCGCAGACTGAGACAGGCACACCCTACATGCTCTAC 280 Query 262151 AAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAGGC--CA 262208 || ||| || |||| || ||||||||||||||||||||||||| || | || || Sbjct 281 AAAGACTCCTGCAACAGGAAGAGCAACCAGCAGAACCTGGGCACCA--TCAAATGCAGCA 338 Query 262209 ACCTGTGCACCGAGATCGT 262227 ||||||| || || ||||| Sbjct 339 ACCTGTGTACAGAAATCGT 357 >seq135846 Length=9076 Score = 93.3 bits (102), Expect = 6e-13 Identities = 122/168 (73%), Gaps = 6/168 (4%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| | ||| Sbjct 4768 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCTATG 4821 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| | ||| || ||| Sbjct 4822 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAAGCTTCCCGC 4881 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAG 725081 ||||||| | |||||| ||| || ||| | || ||||||||| Sbjct 4882 CTGGCGCATTACAACAAACGCTCTACCATCACTTCTCGGGAGATCCAG 4929 >seq140883 Length=29395 Score = 91.5 bits (100), Expect = 2e-12 Identities = 111/150 (74%), Gaps = 6/150 (4%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||| ||| | ||||||||||||||| || | | ||| || ||| ||||| Sbjct 7849 TACAAAGTGTTGAAGCAGGTGCACCCCGACACGGGT-----ATC-TCGTCAAAGGCCATG 7902 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || || |||||||| |||| ||||||| | ||||||| ||| Sbjct 7903 GGCATCATGAACTCCTTCGTTAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCGCGC 7962 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATC 725063 ||||||| || |||||||||| ||| ||| Sbjct 7963 CTGGCGCACTACAACAAGCGCTCCACCATC 7992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7159216250151980