Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq2241 98.7 1e-15 >seq2241 Length=39700 Score = 98.7 bits (108), Expect = 1e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 214100 GAGATGTTTGGACTCGTGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCAC 214159 ||| ||||||| | || || || || ||| ||||||| | || |||||||| || ||| Sbjct 5515 GAGGTGTTTGGTTTGGTCCCAGGCTTGATGATGTACGCTACAATATGGCTGAGGGAACAC 5574 Query 214160 AACAGGGTTTGCGACGTGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTC 214219 ||| |||| || ||| | |||||||| |||||||| || ||| | || || ||||||||| Sbjct 5575 AACCGGGTCTGTGACATCCTGAAACAGGAGCACCCAGAGTGGGATGATGAGCAGCTGTTC 5634 Query 214220 CA 214221 || Sbjct 5635 CA 5636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 721597639089600