Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq156245 89.7 6e-13 seq148742 86.0 8e-12 >seq156245 Length=697 Score = 89.7 bits (98), Expect = 6e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 111278 GTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGG 111337 || ||||| | ||||||||||| | |||| | || || || |||| |||| ||| Sbjct 366 GTATACTCCACGATTTCTGTACACAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGG 307 Query 111338 TTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGT 111397 || |||||| ||||||| | || ||||||||||||||||| || || ||||| ||||| Sbjct 306 TTGCTCTTCCTGTTGCAGGAGTCTTTGTAGAGCATGTAGGGTGTGCCTGTCTCAGTCTGC 247 Query 111398 GA 111399 || Sbjct 246 GA 245 >seq148742 Length=4363 Score = 86.0 bits (94), Expect = 8e-12 Identities = 95/124 (77%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 122678 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTCT 122737 ||||||||| | |||||||||||| ||||| || |||||||| || |||| ||||| Sbjct 501 CCTCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGCCCTGGCATCAGGCCCCTCTTCT 442 Query 122738 TCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796 ||| |||| | ||||| ||| || || || || |||||||| || || || ||||| Sbjct 441 TCAGCCAAAATATAGCAGCA-AAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAG 383 Query 122797 GCAA 122800 |||| Sbjct 382 GCAA 379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 626518521384000