Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq156087 93.3 3e-14 >seq156087 Length=3981 Score = 93.3 bits (102), Expect = 3e-14 Identities = 118/160 (74%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837 || |||| || |||||||| || || || | || || ||||| || || ||||| Sbjct 3267 CCCGTGACATGGGCAATCATATAAGTAAGCAATGAATAGCTGGCAATATTGAAAGGCACT 3326 Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTA-TTTTGTGACAC 111896 ||||| ||||||||||| || || ||||| || || ||||| | || | | | || || Sbjct 3327 CCTAGTCCCATATCTCCAGACCTCTGATAGAGTTGGCATGACAATTCACCATCGAGA-AC 3385 Query 111897 ATAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936 ||| || || |||||| |||| || |||||||| |||||| Sbjct 3386 ATAGAACTGGCAAAGTGCATGGCATGGAGGCAAAGCCATC 3425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391024673594770