Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq11258 170 2e-37 seq22601 89.7 6e-13 >seq11258 Length=1071 Score = 170 bits (188), Expect = 2e-37 Identities = 169/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| || || |||||||| || || || ||||| ||| | | Sbjct 35 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 94 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| ||||||| || || |||||||||||||| ||||| || |||||| Sbjct 95 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAG 154 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || || ||||| ||||| || ||||||| || ||||| | ||||| || Sbjct 155 CAGAGGTTGATCTTCGCTGGCAAGCAGCTGGAGGATGGGCGCACCCTGTCCGACTACAAC 214 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTT 27624 |||| ||||||||||| || ||||| || |||| ||| Sbjct 215 ATCCAGAAGGAATCCACCCTCCATCTTGTGCTGCGCCTT 253 >seq22601 Length=11492 Score = 89.7 bits (98), Expect = 6e-13 Identities = 151/214 (71%), Gaps = 6/214 (3%) Strand=Plus/Minus Query 80575 GGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACAC--GACTCCA 80632 ||||| ||| | | ||||| || || |||| | |||||| |||||||| | || | Sbjct 1462 GGAGAACCCTCATATGTCTCATAGGGTCCCTGCTCCTTGGCAAGCTCACAGCTGGCTTCC 1403 Query 80633 TAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGC-GCGCCTGTGGG 80691 ||| ||| | ||| ||| |||||||| || ||||| | ||| | |||| || Sbjct 1402 AAAGCACCG--TAATAGATGGTCTCAAAGATCTGCTGGTTCA-AGCGCTGGGCCTCGGGA 1346 Query 80692 TCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCG 80751 || || | || | ||||| ||||| | || ||||||||||| || |||||| || Sbjct 1345 CTCTCAAAGGGGAACCTCATCAGGATGAAGGCATCTGCCAGGCCCTGCACCCCGATGCCG 1286 Query 80752 ATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCCT 80785 || || ||||||||| |||| || ||||| |||| Sbjct 1285 ATGGGACGGTGGCGCCTGTTGGAGCGCTCCGCCT 1252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568936023224800