Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq8172 104 2e-17 >seq8172 Length=28163 Score = 104 bits (114), Expect = 2e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304 || || || |||||||||||||| ||||| |||||||| | || || || ||||| ||| Sbjct 1261 GTGGTGGAGGAGCTCTTCCGAGACGGGGTTAACTGGGGCAGGATCGTGGCCTTCTTCGAG 1320 Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364 ||||| || || ||||| ||||| |||||||| | | || | |||| || | || | Sbjct 1321 TTTGGCGGCGTCATGTGCGTGGAGAGCGTCAACCGGGAGATGTCTACCCTTGTAGGCAGC 1380 Query 3365 ATTGCCGCGTGGATGACAGA 3384 || ||||| |||||||| || Sbjct 1381 ATCGCCGCCTGGATGACCGA 1400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 413502933653560