Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq156087 87.8 7e-13 >seq156087 Length=3981 Score = 87.8 bits (96), Expect = 7e-13 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 52110 ATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTTTCG 52169 ||||| ||| |||| |||||| |||| | ||| |||||||| || ||| | | || Sbjct 3424 ATGGCTTTGCCTCCATGCCATGCACTTTGCCAGTTCTATGTTCTCGATGGTGAATTGTCA 3365 Query 52170 TGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAGC 52229 ||||| | |||||| |||||| || ||| | || || || || || ||||||||| Sbjct 3364 TGCCAACTCTATCAGAGGTCTGGAGATATGGGACTAGGAGTGCCTTTCAATATTGCCAGC 3305 Query 52230 TATTCCTTGCTGACGCATCTGATTGC 52255 ||||| ||||| || || ||||||| Sbjct 3304 TATTCATTGCTTACTTATATGATTGC 3279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189660797781900