Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balearica_20regulorum_20gibbericeps_20[refseq_20GCF_5F000709895.1_20
2014-06-25] 53,491 sequences; 1,127,622,302 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq1807 96.9 4e-15
seq25901 93.3 4e-14
>seq1807
Length=48173
Score = 96.9 bits (106), Expect = 4e-15
Identities = 80/98 (82%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531
|| || || ||||| || | ||||||||||||||| |||||||| || ||||| |||||
Sbjct 47389 ATGTAGGTGTCAATAAGAAGACTGTACATTTCTGAATGTATGTTTTCCATGGCAATCTGG 47448
Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTC 16569
|| |||||||| || ||||| || | |||||||||||
Sbjct 47449 AAGCCATAGAAACAACGAGCTTCTGTGATTTGTACTTC 47486
>seq25901
Length=46880
Score = 93.3 bits (102), Expect = 4e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285
|| |||||||| |||||||| ||||| ||||| | || ||||| |||| |||||
Sbjct 11023 TCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCTCTCTTCTTC 10964
Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGC 16344
| ||| ||||| |||||||| || ||||||||||| || || ||||| | ||||| ||
Sbjct 10963 AGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGGC 10905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511072449154120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |