Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balearica_20regulorum_20gibbericeps_20[refseq_20GCF_5F000709895.1_20
2014-06-25] 53,491 sequences; 1,127,622,302 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq28409 122 6e-23
seq32325 91.5 1e-13
>seq28409
Length=25514
Score = 122 bits (134), Expect = 6e-23
Identities = 93/110 (85%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349
||| || ||| ||||||| || | |||||||||| |||||||||| || |||||||||||
Sbjct 2091 CTTGAGGTCCCTGCTGAGCACTATATTAATTCTGTCTTTTAAAGGACGATTCTTCTCAGG 2032
Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCTG 4399
||| |||||||| |||||| ||||||| |||| | |||||||||| |||
Sbjct 2031 AATGGAGAACCAGGTCTTTCTACCCATTATCAGTGCATTCTGTTTACCTG 1982
>seq32325
Length=38855
Score = 91.5 bits (100), Expect = 1e-13
Identities = 109/148 (74%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092
|||| ||||||||||| || ||||||||||| || ||||| || ||||| | ||| || |
Sbjct 36774 CTTTGTATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCCCCCT 36833
Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152
| |||||| | ||||| | ||||| | || | |||||||| ||||||||||
Sbjct 36834 CCTCTCTGGTACTGAAACCCTGCTTATCCAGGAACTCACGTGATCCATTAGCATCCCAAA 36893
Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTT 102180
| | || || ||| || ||||||||
Sbjct 36894 TCTTTACACCCTTTGCAGAGAGCTCTTT 36921
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361015692553241
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |