Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balearica_20regulorum_20gibbericeps_20[refseq_20GCF_5F000709895.1_20
2014-06-25] 53,491 sequences; 1,127,622,302 total letters
Query= NC_001731.1
Length=190289
Score E
Sequences producing significant alignments: (Bits) Value
seq11995 138 1e-27
>seq11995
Length=5632
Score = 138 bits (152), Expect = 1e-27
Identities = 181/251 (72%), Gaps = 0/251 (0%)
Strand=Plus/Plus
Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202
|||||||||||||||||||| | |||||||||||| || || |||||| ||| |||
Sbjct 5366 GAACTTCTCGAAGTTCCAGGAGATGTCGTTGCGGCAGACCGGGGACCAGATGATGTACTG 5425
Query 83203 GGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAA 83262
|||| | ||| |||| | ||||||| || ||||| |||||| |||||
Sbjct 5426 CGGGTTGGTCATCAGCGAGGAGGGGTCGTCGTGCGGGAAGGGCAGCGCCTCTTTCAGGAA 5485
Query 83263 GGCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAAGTT 83322
|| ||| || || || || | ||||| |||||||||||||| || | || || ||
Sbjct 5486 GGTGAACAGGGGGTGCGCGTTCTTCCCGTTCACCTCGCACTTCTCAAACATGATGAAATT 5545
Query 83323 CGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATTCTG 83382
|||| | | ||||| || ||||| ||||||| ||| || ||| |||||| | |||
Sbjct 5546 GGGCTTGTACCCGTTGCCGGGACGAACGTGCTCCAGCGAGAGCAGGATCTCCTCGTTCGT 5605
Query 83383 GGCGTTTTCCT 83393
|| |||||||
Sbjct 5606 AGCATTTTCCT 5616
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 608389735629640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |