Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balearica_20regulorum_20gibbericeps_20[refseq_20GCF_5F000709895.1_20
2014-06-25] 53,491 sequences; 1,127,622,302 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq16976 96.9 3e-15
>seq16976
Length=50896
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
|| || ||||| || ||||| ||||| | |||||| || | || |||||||| |||||
Sbjct 50469 GTAGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 50528
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
|| | || | |||||||| || ||| | |||||||||||| ||| || |||
Sbjct 50529 GCGAAGATCAACCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATTTTGGCCTTC 50588
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | | || |||| |||||| || | ||| ||||||||||| || | ||
Sbjct 50589 ACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTTATGGTCTTGCCAGTCATGGTC 50648
Query 21159 TTGACAAATATTTGCATTTTGAA 21181
|| ||||| || ||||| || ||
Sbjct 50649 TTCACAAAGATCTGCATGTTTAA 50671
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||| | ||| | ||||| ||||| || ||||| ||||| | |||||| || | ||
Sbjct 49770 AGCACAAGATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 49829
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| ||||| ||||| || | || | |||||||| || ||| | ||||||||||||
Sbjct 49830 TCTAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCC 49889
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||| || ||||| | | | || |||| |||||| || | ||| || |||
Sbjct 49890 TGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATTGTC 49949
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
||||| || | || || ||||| || |||||
Sbjct 49950 TTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 49981
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
|| || ||||| || ||||| ||||| | |||||| || | || |||||||| |||||
Sbjct 50013 GTAGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 50072
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
|| | || | |||||||| || ||| | |||||||||||| ||| || |||
Sbjct 50073 GCGAAGATCAACCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATTTTGGCCTTC 50132
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | | || |||| |||||| || | ||| ||||||||||| || | ||
Sbjct 50133 ACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTC 50192
Query 21159 TTGACAAATATTTGCAT 21175
|| ||||| || |||||
Sbjct 50193 TTCACAAAGATCTGCAT 50209
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||| | ||| | ||||| ||||| || ||||| ||||| | |||||| || | ||
Sbjct 50226 AGCACAAGATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 50285
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| ||||| ||||| || | || | |||||||| || ||| | ||||||||||||
Sbjct 50286 TCTAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCC 50345
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||| || ||||| | | | || |||| |||||| || | ||| || |||
Sbjct 50346 TGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATTGTC 50405
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
||||| || | || || ||||| || |||||
Sbjct 50406 TTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 50437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421983920122556
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |