Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balearica_20regulorum_20gibbericeps_20[refseq_20GCF_5F000709895.1_20 2014-06-25] 53,491 sequences; 1,127,622,302 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq11560 87.8 2e-12 >seq11560 Length=34702 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/125 (77%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 153684 ACTATTTCCGCACACAAATTGCTGCATTTTATCAGGCCGCAATTACT-TTGATTGCTTTT 153742 |||||||| | ||| | |||||||||||| || | || ||| | || |||||||| || Sbjct 9778 ACTATTTCTGTACATAGATTGCTGCATTTGAT-GGTCCCCAAGTTCTGCTGATTGCTCTT 9720 Query 153743 GCGGTTACAAGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTCGGCTTGAATTTCTAT 153802 ||||| |||| ||| ||||| |||||||| || |||||||| || | ||| ||| || Sbjct 9719 CCGGTTGCAAGAGTCTTTGTACAGCATGTACGGCGTGCCGGTCTCTGTCTGAGATTCAAT 9660 Query 153803 AATAG 153807 |||| Sbjct 9659 GATAG 9655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495732313007200