Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balearica_20regulorum_20gibbericeps_20[refseq_20GCF_5F000709895.1_20
2014-06-25] 53,491 sequences; 1,127,622,302 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq49898 123 4e-24
>seq49898
Length=372
Score = 123 bits (136), Expect = 4e-24
Identities = 173/243 (71%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || |||| || || || |||||||| || ||||||||||| || ||
Sbjct 53 CGCCAAGCGGCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCCAT 112
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || |||||||| || || || || ||||| |||| || | |||| || ||||
Sbjct 113 CCGCCGCCTGGCTCGGCGCGGCGGCGTGAAGCGCATCTCGGGGCTCATCTACGAGGAGAC 172
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || | ||| ||||||| ||| ||| |||| || || || ||| |||||
Sbjct 173 GCGCGGCGTGCTCAAGGTCTTCCTGGAGAACGTGATCCGCGACGCCGTCACCTACACCGA 232
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| ||||| ||||||| | ||||| || | || || || ||
Sbjct 233 GCACGCCAAGAGGAAGACGGTCACGGCCATGGACGTGGTCTACGCCCTCAAGCGCCAGGG 292
Query 16672 CCG 16674
||
Sbjct 293 ACG 295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79026292804263
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |