Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balearica_20regulorum_20gibbericeps_20[refseq_20GCF_5F000709895.1_20
2014-06-25] 53,491 sequences; 1,127,622,302 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq25901 91.5 3e-13
seq11560 91.5 3e-13
>seq25901
Length=46880
Score = 91.5 bits (100), Expect = 3e-13
Identities = 104/137 (76%), Gaps = 2/137 (1%)
Strand=Plus/Plus
Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755
|| ||||| |||| |||||| | || || || ||||||||||| ||||| |||| ||
Sbjct 10890 GGTGAGAGAGTGGTTGCCTTTGCTGCAGTTGAAGGCATCTTCTTTTCGGGTTCCTTTGCT 10949
Query 42756 TCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACT 42814
| || || ||||| ||| ||| ||| | |||||| ||||| || ||||| || |||||
Sbjct 10950 GCTATATTTTGGCTGAAGAAGAGAGGCCT-GATGCCTGGACTGACTTTCTCCAATGAACT 11008
Query 42815 CATCAGCAGGGACGAGG 42831
|| ||||| || ||||
Sbjct 11009 TATTAGCAGAGATGAGG 11025
>seq11560
Length=34702
Score = 91.5 bits (100), Expect = 3e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 245008 CTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTC 245067
|| ||||||||| || || ||||||||||| ||| ||||| |||| | |||||| ||
Sbjct 8435 CTTCATGAAGAGATCAGGAATCCAGAGGGCAAAGAAAAGGTCTCTGGCTCGCTGCTCCTC 8376
Query 245068 CGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCAT 245127
|||||||||||| | | || | ||| ||||||| ||| | ||||| |||||||
Sbjct 8375 TTTCCCAGTGTTCTTCTTTAAGTCAAGAAACTCAAAGATGTCCAAATGCCATGGCTCCAG 8316
Query 245128 GTAGA 245132
|||||
Sbjct 8315 GTAGA 8311
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 943707779398160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |