Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balearica_20regulorum_20gibbericeps_20[refseq_20GCF_5F000709895.1_20
2014-06-25] 53,491 sequences; 1,127,622,302 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq12342 116 3e-20
>seq12342
Length=2830
Score = 116 bits (128), Expect = 3e-20
Identities = 898/1435 (63%), Gaps = 34/1435 (2%)
Strand=Plus/Minus
Query 517265 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 517324
||||| || |||||||||||||| | ||||| ||||| || || || ||||| || |
Sbjct 1945 ACATTCAGGATACCATTGGCATCGATGTCAAAAGTGACCTCGATCTGGGGGACTCCACGG 1886
Query 517325 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 517384
| || || ||||| ||| | | ||| | ||||| || || || || || |
Sbjct 1885 GGTGCCGGGGGGATGCCTGTTAGGTCAAACTTGCCCAGCAAGTTGTTGTCCTTCGTCATA 1826
Query 517385 TTTCGTTCACCCTCGAAAATTTGGAT-AGTA-ACTACAGTTTGATTATCTGAATAAGTTG 517442
| ||||||||| | | |||| || | ||| | | || || ||||| ||||| |
Sbjct 1825 GCCCTCTCACCCTCGTACACCTGGACCAGGACACTGC--TCTGGTTGTCTGAGTAAGTGG 1768
Query 517443 TAAATACTCTGGATTT-TTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATA 517501
| || |||| ||| ||| ||||| || ||||| | | || | | ||||||
Sbjct 1767 TGAAGG-TCTGCGTTTGTTTGGTGGGAATGGTAGTGTTACGCTTGATGAGAGCGGTCATC 1709
Query 517502 ATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTT 517561
| ||||| || || || | || || || ||||| |||||||| | || | | ||
Sbjct 1708 ACTCCACCAGCCGTCTCAATGCCCAGGGACAGAGGGGTGACATCCAACAGCAGCAGATCC 1649
Query 517562 TGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCA 517621
|| | || ||| | | || | || ||||||||||| | |||||| ||||| |||
Sbjct 1648 TGCACATTCTCAGACTTATCGCCCATGAGGATAGCTGCTTGCACAGCAGCGCCATAAGCA 1589
Query 517622 ACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAG 517680
||||| |||||||| || | | | || || | ||| |||||||| || | || |
Sbjct 1588 ACAGCCTCATCAGGGTTGATGCTCTTGTTGAGCTCTTTGCCATTGAAGAAGTCCTGTAGC 1529
Query 517681 AAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTG 517740
|| || | | ||| || ||||| | || || || || | || || || || | |||
Sbjct 1528 AACTT-TTGGATCTTGGGGATACGGGTGGAGCCACCCACCAGCACGATCTCCTGGATCTG 1470
Query 517741 TGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAA 517800
| || || || || | ||| | | || || || || || || | | ||
Sbjct 1469 TCCCTTGTCTAGCTTGGCATCACGCAGGGCCTTCTCCACTGGCTCCAGGGTGCCACGGAA 1410
Query 517801 CAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAA---GAGTGACATTATAATCAAT 517857
| || | | || || ||||| || | ||||| |||| | |||||||
Sbjct 1409 GAGATCAGCATTGAGCTCCTCGAAGCGGGCACGAGTAATGGAAGTG---TAGAAATCAAT 1353
Query 517858 TCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGA--AGATAGTGCACGT 517915
|| || || | || |||| ||||| ||| ||| || ||||| || |||| ||
Sbjct 1352 ACCCTCAAAAAGGGAGTCAATCTCAATGCTAGCTTGTGTGGAAGAGCTGAGAGTG--CGC 1295
Query 517916 TTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT--GATTCAAAT 517973
|| || | ||||| ||||| | |||| | | || | ||| || | | |
Sbjct 1294 TTTGCCCTCTCACAAGCTGTACGCAGTCGCCTCACCGC--TCGCTTGTTACCAGCAATGT 1237
Query 517974 CTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTATCAAA 518031
|| || | || | |||||| ||||| |||| ||| | || | || || |||||
Sbjct 1236 CTCGCTTGTGCTTACGCTTGAATTCTTC--CACAAAATGGTTCACCATGCGGTTGTCAAA 1179
Query 518032 ATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTC 518091
|| || || |||| | || | || | || | | || | || | ||||| ||
Sbjct 1178 GTCCTCCCCACCCAGATGGGTGTCACCAGCTGTGGACTTCACCTCAAAGATGCCATCCTC 1119
Query 518092 AAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCAT 518151
|| | | | | ||||| || || || |||| ||||| || || |||||| |
Sbjct 1118 AATGGTAAGGATGGACACATCGAAAGTGCCCCCTCCCAAGTCAAAGATCAGCACATTCTT 1059
Query 518152 TTCTTTGTCTTGG------TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 518205
||| | || || || || | ||||| || | |||||| || || || ||
Sbjct 1058 CTCTCCAGCCCGGGTACCTTTCTTGTCCAAGCCATAGGCTATAGCAGCTGCTGTGGGCTC 999
Query 518206 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 518265
|| ||||| | || |||||||| |||| || | || |||||||| ||||| || |
Sbjct 998 GTTGATAATACGCATCACATTAAGGCCAGTGATGGTGCCGGCATCTTTGGTGGCCTGGCG 939
Query 518266 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAAT 518325
|| || || || || || ||||| ||||| || || |||| || | || |
Sbjct 938 CTGAGAGTCATTGAAGTAAGCAGGCACAGTGATGACAGCATTCTGCACCTTGCGCCCCAG 879
Query 518326 ATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGA 518385
||| || || | | ||||| || | | | ||| || || | ||| ||||
Sbjct 878 ATAGGCCTCAGCAATCTCCTTCATCTTGGTAAGGACCATGGAGCTGATCTCCTCT-GGGA 820
Query 518386 ATATTGCTTGGAT-TCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAA 518444
| | | || || ||| | || |||| | | || || ||| |||| |
Sbjct 819 AGAAGGTTTTCATCTCACCCTTGTACTCCACTTGCACCTTGGGCTTGCCACCCTCATTCA 760
Query 518445 TAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTAC 518504
|| || ||||||| ||||| || || || || | |||||| | | | | |
Sbjct 759 CCACACGGAAGGGCCAGTGCTTCATGTCAGACTGCACCGTAGGGTCATCATACTTGCGGC 700
Query 518505 CAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGG 518564
| || | || || |||||||| || || ||||| || || ||||| | || | ||||
Sbjct 699 CGATGAGGCGCTTGGCATCAAAGATGGTGTTGGTAGGGTTCATTGCCACCTGGTTCTTGG 640
Query 518565 CTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGAT 518624
| ||||| || || || | ||||| || || || | ||||| || || ||||| |
Sbjct 639 CAGCATCACCGATGAGGCGCTCTGTATCGGTGAAGGCCACATAGCTGGGCGTGGTGCGGT 580
Query 518625 TACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 518679
| || || ||||| || || || || ||||| |||| || | ||||| || ||
Sbjct 579 TGCCCTGGTCATTGGCGATGATCTCCACTTTGCCATGCTGGAAGACACCCACGCA 525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3778168000380646
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