Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balearica_20regulorum_20gibbericeps_20[refseq_20GCF_5F000709895.1_20
2014-06-25] 53,491 sequences; 1,127,622,302 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq22909 201 1e-46
seq46499 89.7 7e-13
>seq22909
Length=29343
Score = 201 bits (222), Expect = 1e-46
Identities = 372/543 (69%), Gaps = 6/543 (1%)
Strand=Plus/Minus
Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099
|| || || || || |||||||| || || || | || ||||| ||||| || || ||
Sbjct 1884 GCACCATAAGCCACAGCCTCATCAGGATTGATGCTCTTGTTCAGCTCTTTGCCATTGAAG 1825
Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159
|||| | || || ||||| || ||||| || || || ||||| |||| |||||
Sbjct 1824 AAATCTTGCAGCAGTTTCTGAATCTTTGGGATACGAGTAGACCCACCAACCAGCACGATG 1765
Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219
|| | | | |||||| |||| ||| | || || || | ||||| ||||| ||||
Sbjct 1764 TCGTGGATCTGCGATTTGTCGAGCTTGGCATCCCGCAGGGCCTTTTCCACAGGATCCAGG 1705
Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279
|||||||| ||| ||| || ||||| || || | |||||||||||| |||
Sbjct 1704 GTGCCACGGAACAGGTCGGCGTTCAGCTCTTCAAAGCGAGCTCTGGTAATGGATGTGTAG 1645
Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339
|| |||| || || || | ||||||||||| || | | || | | || || |
Sbjct 1644 AAGTCAATACCCTCATAGAGAGAATCAATTTCGATACTGGCCTGCGTGCTAGACGACAGA 1585
Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399
|| |||||||| ||||| || || || || | || |||| || | | ||| ||
Sbjct 1584 GTGCGCTTTGCACGCTCGCATGCAGTGCGGAGGCGGCGAACTGCTCTCTTGTTCTCGCTG 1525
Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT-GTCGA--AGGAGTCTCGAA 7456
|| |||||||| || || || || || || || ||||| || || | | | |
Sbjct 1524 ATGTCTTTCTTGTGCTTGCGCTTGAATTCAGCAATGAAGTGGTTGACCATGCGGTT---G 1468
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|| || ||||| ||||||||||| || || || || || | ||| || |||||||| ||
Sbjct 1467 TCAAAGTCTTCTCCACCCAAGTGAGTGTCACCTGCAGTGGATTTCACCTCAAAGATGCCA 1408
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
||||||| | | | ||| |||||||| || ||||| || |||||||| || || |||
Sbjct 1407 TCTTCAATAGTCAGAATCGACACATCAAAGGTGCCACCTCCAAGGTCAAAGATAAGAACG 1348
Query 7577 TTC 7579
|||
Sbjct 1347 TTC 1345
Score = 82.4 bits (90), Expect = 1e-10
Identities = 138/200 (69%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 6635 CCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTT 6694
||||||||||| || || || ||||| | || || | | |||||| |||||
Sbjct 2929 CCCTTATCATTTGTTATTGTGATCTTGTTCTCCTTGCCAGTGCTCTTATCCACAGCAGAC 2870
Query 6695 ACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTC 6754
||||||| || || || ||||||| ||| || |||| | ||| || ||| ||| ||
Sbjct 2869 ACATTCAGGATGCCGTTGGCATCAATATCAAAGGTTACTTCAATCTGAGGTACACCTCTG 2810
Query 6755 GGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTC 6814
|| || | |||||||| || | ||||| | || || || |||| ||| | | | |
Sbjct 2809 GGAGCAGGGGGAATACCAGTCAGCTCAAACTTGCCCAGCAAGTTGTTGTCCTTAGTCATA 2750
Query 6815 TTACGTTCACCTTCATAGAC 6834
|||||| |||||||| ||
Sbjct 2749 GCACGTTCTCCTTCATACAC 2730
>seq46499
Length=6643
Score = 89.7 bits (98), Expect = 7e-13
Identities = 129/181 (71%), Gaps = 6/181 (3%)
Strand=Plus/Minus
Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTT---TGGTTC 7993
||||| || || || |||||||| || ||||| | |||||| || || ||||||
Sbjct 225 CCGATGAGCCGTTTGGCATCAAACACAGTGTTCTCGGGGTT---GGACGTGAGCTGGTTC 169
Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053
|| || ||||||||||| | || || | ||| ||||| ||||| || || ||
Sbjct 168 TTGGCGGCGTCCCCGATCAAGCGCTCCCCCTCGGGCGTGAACGCCACGTAGGACGGCGTG 109
Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACG 8113
| || ||||| |||||||| || || ||||| |||||| | || | ||||||| |||
Sbjct 108 ATGCGGTTCCCCTGGTCGTTGGCGATGATTTCCACGCGGCCATTCTTGAAGACGCCCACG 49
Query 8114 C 8114
|
Sbjct 48 C 48
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 634708126392440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |