Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balearica_20regulorum_20gibbericeps_20[refseq_20GCF_5F000709895.1_20
2014-06-25] 53,491 sequences; 1,127,622,302 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq22909 107 2e-17
seq46499 87.8 1e-11
>seq22909
Length=29343
Score = 107 bits (118), Expect = 2e-17
Identities = 112/147 (76%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450
||||| |||| ||| | ||||| ||||| || || |||||||| || ||||| || ||
Sbjct 1063 GTTACTAATGCTGTAGTGACTGTGCCAGCCTACTTCAATGACTCTCAGCGTCAGGCAACA 1122
Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510
|||||||||||| || || || || || || || || ||||||||||| || || |||
Sbjct 1123 AAAGATGCTGGAACCATCGCAGGGCTCAACGTACTGCGAATTATCAATGAGCCGACAGCT 1182
Query 550511 GCTGCACTTGCATATGGACTTGATAAA 550537
||||| | || ||||| || || |||
Sbjct 1183 GCTGCCATAGCCTATGGCCTGGACAAA 1209
>seq46499
Length=6643
Score = 87.8 bits (96), Expect = 1e-11
Identities = 112/152 (74%), Gaps = 2/152 (1%)
Strand=Plus/Plus
Query 552115 ATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAAT-GTTAAGT 552173
|||| ||||| ||||||||||| ||||| | || || ||||| | || | ||||||
Sbjct 1917 ATGAGATTGTTCTTGTTGGTGGCTCTACTCGCATCCCCAAAATACAGCAACTAGTTAAGG 1976
Query 552174 TCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTAT 552233
|| ||||||||| ||| || | | ||||||||||||||||||| ||||||
Sbjct 1977 AGTT-TTTCAATGGGAAAGAACCTTCTCGTGGCATTAATCCAGATGAGGCTGTAGCCTAT 2035
Query 552234 GGTGCCGCAATTCAAGCAGCTATTCTTTCTGG 552265
||||| || |||| || | | |||| |||||
Sbjct 2036 GGTGCGGCTGTTCAGGCTGGTGTTCTCTCTGG 2067
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4026467154675590
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |