Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balearica_20regulorum_20gibbericeps_20[refseq_20GCF_5F000709895.1_20 2014-06-25] 53,491 sequences; 1,127,622,302 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1920 89.7 2e-12 >seq1920 Length=2790 Score = 89.7 bits (98), Expect = 2e-12 Identities = 136/189 (72%), Gaps = 10/189 (5%) Strand=Plus/Plus Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTC--TTCCGGTCGTAGCC 302692 || || ||||| |||| | |||||| || |||||||| | ||| || ||| || | Sbjct 944 TCGATGAGACCCTCACGGCGACCCATGGCGTGGAAGAAGAACTCGGTTGGGGTG--AGGC 1001 Query 302693 CCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CG-AATCGTCGAACTTGG 302749 | | | ||||| |||| || ||||| || |||||| || ||||||| |||| Sbjct 1002 CGGCCAGGTAGGAGTTCTCCACAAAACCTCGGCTCTCGGGGCCGTAATCGTC---CTTGA 1058 Query 302750 TAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCT 302809 | ||||| ||||| || | || || | ||| | ||||| ||||| || |||||||||| Sbjct 1059 TGAAGTGGGGCAGCGTACGGTGCTTGAAACCGAAGGGGATCCGCTTGCCCTCAACGTTCT 1118 Query 302810 GCTGTCCCA 302818 ||||||||| Sbjct 1119 GCTGTCCCA 1127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1470808884748467