Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balearica_20regulorum_20gibbericeps_20[refseq_20GCF_5F000709895.1_20
2014-06-25] 53,491 sequences; 1,127,622,302 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq43387 232 1e-54
seq21691 232 1e-54
seq10346 232 1e-54
seq9101 232 1e-54
seq2860 232 1e-54
seq39329 188 1e-41
seq37333 174 2e-37
>seq43387
Length=1625
Score = 232 bits (256), Expect = 1e-54
Identities = 205/256 (80%), Gaps = 0/256 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| |||||||||||| ||||||| |||||| |||
Sbjct 600 TGTACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCGCCGGGCA 541
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| || |||||||| ||||||||||| || | | ||| ||| ||||||||| |
Sbjct 540 GCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGATGGTGGAGCGCTTGTTGTAGT 481
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| ||||||| | ||||||| |||| ||||||||||| || |||||||
Sbjct 480 GCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 421
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| |||||||||||||||||| ||||||||||
Sbjct 420 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 361
Query 1485710 AAACAAAGGACGAGTA 1485725
| || || ||||||
Sbjct 360 ACACGTAGATCGAGTA 345
>seq21691
Length=1754
Score = 232 bits (256), Expect = 1e-54
Identities = 205/256 (80%), Gaps = 0/256 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| |||||||||||| ||||||| |||||| |||
Sbjct 716 TGTACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCGCCGGGCA 657
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| || |||||||| ||||||||||| || | | ||| ||| ||||||||| |
Sbjct 656 GCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGATGGTGGAGCGCTTGTTGTAGT 597
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| ||||||| | ||||||| |||| ||||||||||| || |||||||
Sbjct 596 GCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 537
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| |||||||||||||||||| ||||||||||
Sbjct 536 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 477
Query 1485710 AAACAAAGGACGAGTA 1485725
| || || ||||||
Sbjct 476 ACACGTAGATCGAGTA 461
>seq10346
Length=1073
Score = 232 bits (256), Expect = 1e-54
Identities = 205/256 (80%), Gaps = 0/256 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| |||||||||||| ||||||| |||||| |||
Sbjct 198 TGTACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCGCCGGGCA 257
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| || |||||||| ||||||||||| || | | ||| ||| ||||||||| |
Sbjct 258 GCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGATGGTGGAGCGCTTGTTGTAGT 317
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| ||||||| | ||||||| |||| ||||||||||| || |||||||
Sbjct 318 GCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 377
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| |||||||||||||||||| ||||||||||
Sbjct 378 TGATGCTCATGGCCTTGGATGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 437
Query 1485710 AAACAAAGGACGAGTA 1485725
| || || ||||||
Sbjct 438 ACACGTAGATCGAGTA 453
>seq9101
Length=961
Score = 232 bits (256), Expect = 1e-54
Identities = 205/256 (80%), Gaps = 0/256 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| |||||||||||| ||||||| |||||| |||
Sbjct 529 TGTACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCGCCGGGCA 588
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| || |||||||| ||||||||||| || | | ||| ||| ||||||||| |
Sbjct 589 GCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGATGGTGGAGCGCTTGTTGTAGT 648
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| ||||||| | ||||||| |||| ||||||||||| || |||||||
Sbjct 649 GCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 708
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| |||||||||||||||||| ||||||||||
Sbjct 709 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 768
Query 1485710 AAACAAAGGACGAGTA 1485725
| || || ||||||
Sbjct 769 ACACGTAGATCGAGTA 784
>seq2860
Length=5770
Score = 232 bits (256), Expect = 1e-54
Identities = 205/256 (80%), Gaps = 0/256 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| ||||| |||||||||||| ||||||| |||||| |||
Sbjct 699 TGTACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCGCCGGGCA 640
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| || |||||||| ||||||||||| || | | ||| ||| ||||||||| |
Sbjct 639 GCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGATGGTGGAGCGCTTGTTGTAGT 580
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||||||| ||||||| | ||||||| |||| ||||||||||| || |||||||
Sbjct 579 GCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 520
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| |||||||||||||||||| ||||||||||
Sbjct 519 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 460
Query 1485710 AAACAAAGGACGAGTA 1485725
| || || ||||||
Sbjct 459 ACACGTAGATCGAGTA 444
>seq39329
Length=3350
Score = 188 bits (208), Expect = 1e-41
Identities = 188/244 (77%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||| ||||||||||||||||| |||||||||||| ||||||| || ||| |||
Sbjct 2261 TGTACTTGGTCACGGCCTTGGTACCCTCGGAGACGGCGTGCTTGGCCAGCTCACCGGGCA 2320
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| || || ||||| ||||||||||| || | ||| ||| |||||||||| |
Sbjct 2321 GCAGGAGCCGGACGGCCGTCTGGATCTCCCGTGAAGTGATGGTGGAGCGCTTGTTATAGT 2380
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| |||||||| |||||| ||||||| |||| || || |||||||| |||||||
Sbjct 2381 GAGCCAGGCGCGAAGCCTCGCCAGCGATGCGCTCGAAGATATCATTGACAAAGGAGTTCA 2440
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
| || ||| | || |||||| || |||||||||||||||||| ||||||||||
Sbjct 2441 TTATACCCATAGCCTTAGAGGAGATACCGGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 2500
Query 1485710 AAAC 1485713
| ||
Sbjct 2501 ATAC 2504
>seq37333
Length=21784
Score = 174 bits (192), Expect = 2e-37
Identities = 185/244 (76%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| || ||||| ||||| |||||||||||| |||||||||| || | |
Sbjct 5698 TGTACTTGGTGACAGCTTTGGTGCCCTCCGAGACGGCGTGCTTGGCCAGTTCTCCCGGGA 5757
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||||||||| |||||||| || || |||| ||| ||| ||||||||
Sbjct 5758 GCAGCAGGCGCACAGCGGTCTGAATTTCCCGGGAAGTGATGGTGGAACGCTTGTTGTAAT 5817
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| ||||||||| ||| || | ||||| || | ||||||||||| || |||||||
Sbjct 5818 GGGCCAGGCGGGAGGCTTCTCCAGCAATGCGCTCAAAGATGTCGTTGACGAAGGAGTTCA 5877
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||| | ||| ||||||||| ||||||||| |||||||| ||||||||||
Sbjct 5878 TGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGTGGACCTGCTTCAGCACCTTGT 5937
Query 1485710 AAAC 1485713
| ||
Sbjct 5938 AGAC 5941
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7910556318357549
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |