Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balearica_20regulorum_20gibbericeps_20[refseq_20GCF_5F000709895.1_20
2014-06-25] 53,491 sequences; 1,127,622,302 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq12342 116 3e-20
>seq12342
Length=2830
Score = 116 bits (128), Expect = 3e-20
Identities = 900/1436 (63%), Gaps = 36/1436 (3%)
Strand=Plus/Minus
Query 281432 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 281491
||||| || |||||||||||||| | ||||| ||||| || || || ||||| || |
Sbjct 1945 ACATTCAGGATACCATTGGCATCGATGTCAAAAGTGACCTCGATCTGGGGGACTCCACGG 1886
Query 281492 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 281551
| || || ||||| ||| | | ||| | ||||| || || || || || |
Sbjct 1885 GGTGCCGGGGGGATGCCTGTTAGGTCAAACTTGCCCAGCAAGTTGTTGTCCTTCGTCATA 1826
Query 281552 TTTCGTTCACCCTCGAAAATTTGGAT-AGTA-ACTACAGTTTGATTATCTGAATAAGTTG 281609
| ||||||||| | | |||| || | ||| | | || || ||||| ||||| |
Sbjct 1825 GCCCTCTCACCCTCGTACACCTGGACCAGGACACTGC--TCTGGTTGTCTGAGTAAGTGG 1768
Query 281610 TAAATACTCTGGATTT-TTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATA 281668
| || |||| ||| ||| ||||| || ||||| | | || | | ||||||
Sbjct 1767 TGAAGG-TCTGCGTTTGTTTGGTGGGAATGGTAGTGTTACGCTTGATGAGAGCGGTCATC 1709
Query 281669 ATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTT 281728
| |||||||| || || | || || || ||||| |||||||| | || | | ||
Sbjct 1708 ACTCCACCAGCCGTCTCAATGCCCAGGGACAGAGGGGTGACATCCAACAGCAGCAGATCC 1649
Query 281729 TGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCA 281788
|| | || ||| | | || | || ||||||||||| | |||||| ||||| |||
Sbjct 1648 TGCACATTCTCAGACTTATCGCCCATGAGGATAGCTGCTTGCACAGCAGCGCCATAAGCA 1589
Query 281789 ACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAG 281847
||||| |||||||| || | | | || || | ||| |||||||| || | || |
Sbjct 1588 ACAGCCTCATCAGGGTTGATGCTCTTGTTGAGCTCTTTGCCATTGAAGAAGTCCTGTAGC 1529
Query 281848 AAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTG 281907
|| || | | ||| || ||||| | || || || || | || || || || | |||
Sbjct 1528 AACTT-TTGGATCTTGGGGATACGGGTGGAGCCACCCACCAGCACGATCTCCTGGATCTG 1470
Query 281908 TGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAA 281967
| || || || || | ||| | | || || || || || || | | ||
Sbjct 1469 TCCCTTGTCTAGCTTGGCATCACGCAGGGCCTTCTCCACTGGCTCCAGGGTGCCACGGAA 1410
Query 281968 CAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAA---GAGTGACATTATAATCAAT 282024
| || | | || || ||||| || | ||||| |||| | |||||||
Sbjct 1409 GAGATCAGCATTGAGCTCCTCGAAGCGGGCACGAGTAATGGAAGTG---TAGAAATCAAT 1353
Query 282025 TCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGA--AGATAGTGCACGT 282082
|| || || | || |||| ||||| ||| ||| || ||||| || |||| ||
Sbjct 1352 ACCCTCAAAAAGGGAGTCAATCTCAATGCTAGCTTGTGTGGAAGAGCTGAGAGTG--CGC 1295
Query 282083 TTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT--GATTCAAAT 282140
|| || | ||||| ||||| | |||| | | || | ||| || | | |
Sbjct 1294 TTTGCCCTCTCACAAGCTGTACGCAGTCGCCTCACCGC--TCGCTTGTTACCAGCAATGT 1237
Query 282141 CTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTATCAAA 282198
|| || | || | |||||| ||||| |||| ||| | || | || || |||||
Sbjct 1236 CTCGCTTGTGCTTACGCTTGAATTCTTC--CACAAAATGGTTCACCATGCGGTTGTCAAA 1179
Query 282199 ATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTC 282258
|| || || |||| | || | || | || | | || | || | ||||| ||
Sbjct 1178 GTCCTCCCCACCCAGATGGGTGTCACCAGCTGTGGACTTCACCTCAAAGATGCCATCCTC 1119
Query 282259 AAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCAT 282318
|| | | | | ||||| || || || |||| ||||| || || |||||| |
Sbjct 1118 AATGGTAAGGATGGACACATCGAAAGTGCCCCCTCCCAAGTCAAAGATCAGCACATTCTT 1059
Query 282319 TTCTTTGTCTTGG------TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 282372
||| | || || || || | ||||| || | |||||| || || || ||
Sbjct 1058 CTCTCCAGCCCGGGTACCTTTCTTGTCCAAGCCATAGGCTATAGCAGCTGCTGTGGGCTC 999
Query 282373 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 282432
|| ||||| | || |||||||| |||| || | || |||||||| ||||| || |
Sbjct 998 GTTGATAATACGCATCACATTAAGGCCAGTGATGGTGCCGGCATCTTTGGTGGCCTGGCG 939
Query 282433 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCA-TCTGTTACTTCTTTTCCAA 282491
|| || || || || || ||||| ||||| || || ||| |||| || | || |
Sbjct 938 CTGAGAGTCATTGAAGTAAGCAGGCACAGTGATGACAGCATTCTG-CACCTTGCGCCCCA 880
Query 282492 TATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAG 282551
||| || || | | ||||| || | | | ||| || || | ||||| |
Sbjct 879 GATAGGCCTCAGCAATCTCCTTCATCTTGGTAAGGACCATGGAGCTGATCTCCTCTGG-G 821
Query 282552 AATATTGCTTGGAT-TCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTA 282610
|| | | || || ||| | || |||| | | || || ||| ||||
Sbjct 820 AAGAAGGTTTTCATCTCACCCTTGTACTCCACTTGCACCTTGGGCTTGCCACCCTCATTC 761
Query 282611 ATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTA 282670
| || || ||||| | ||||| || || || || | |||||| | | | |
Sbjct 760 ACCACACGGAAGGGCCAGTGCTTCATGTCAGACTGCACCGTAGGGTCATCATACTTGCGG 701
Query 282671 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTG 282730
|| || | || || |||||||| || || ||||| || || | ||| | || | |||
Sbjct 700 CCGATGAGGCGCTTGGCATCAAAGATGGTGTTGGTAGGGTTCATTGCCACCTGGTTCTTG 641
Query 282731 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 282790
|| ||||| || || || | ||||| || || || | ||||| || || |||||
Sbjct 640 GCAGCATCACCGATGAGGCGCTCTGTATCGGTGAAGGCCACATAGCTGGGCGTGGTGCGG 581
Query 282791 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 282846
|| || || ||||| || || || || ||||| |||| || | ||||| || ||
Sbjct 580 TTGCCCTGGTCATTGGCGATGATCTCCACTTTGCCATGCTGGAAGACACCCACGCA 525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3738004217952966
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |