Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balearica_20regulorum_20gibbericeps_20[refseq_20GCF_5F000709895.1_20
2014-06-25] 53,491 sequences; 1,127,622,302 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq33158 118 3e-23
seq6124 98.7 3e-17
>seq33158
Length=92320
Score = 118 bits (130), Expect = 3e-23
Identities = 70/73 (96%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
|||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct 31721 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAT 31780
Query 2828 CCCGGGCTTCAGC 2840
|||||||||||||
Sbjct 31781 CCCGGGCTTCAGC 31793
Score = 114 bits (126), Expect = 4e-22
Identities = 69/73 (95%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |
Sbjct 43567 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 43508
Query 2828 CCCGGGCTTCAGC 2840
|||||||||||||
Sbjct 43507 CCCGGGCTTCAGC 43495
>seq6124
Length=16713
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 5918 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 5977
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 5978 CCGGGTTTCGGC 5989
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15840327067695
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |