Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balearica_20regulorum_20gibbericeps_20[refseq_20GCF_5F000709895.1_20
2014-06-25] 53,491 sequences; 1,127,622,302 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq9186 163 4e-35
>seq9186
Length=1033
Score = 163 bits (180), Expect = 4e-35
Identities = 581/899 (65%), Gaps = 38/899 (4%)
Strand=Plus/Plus
Query 13671 CCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAG 13730
|| ||||||| ||| |||| ||||| || ||||||||||| || || |||||| ||||
Sbjct 143 CCGCTGAGCCAGGAGGAGGCAGAGTTCCCTATCGCCTACTCCATGGTCATCCACAACAAA 202
Query 13731 ATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTC 13790
||||||||||||||||| |||||| || || | |||||||| |||| ||||||||| |
Sbjct 203 ATCGAGATGTTCGAGCGGCTCCTGCGGTCCCTGTACGCCCCTACGAACGTCTACTGCGGC 262
Query 13791 -----------CACG---TGGACTCCAAGTCCGGCGACGAGTTCATCCGGGGCGTCTCGG 13836
|||| | ||| ||||||| | || ||| || ||| ||
Sbjct 263 CCCATTGACAGCACGTCATTGACAGCAAGTCCCCGGCCGCCTTCCAGGAGGCCGTGCGGG 322
Query 13837 CCATCGCCAGGTGCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACG 13896
|||| | |||||||| || || |||| ||| ||| | | ||||| || |
Sbjct 323 CCATTGTAGCTTGCTTCCCCAATGTCTTTGTGGCTAGCCGCCTGGAAAAGGTGGTCTATG 382
Query 13897 GCTCCTGGAGTCGCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCG 13956
||||||| || ||||||||||||||| ||||||| ||||||| ||| |
Sbjct 383 CCTCCTGGTCCCGGCTGCAGGCCGACCTCAACTGCATGCAGGACCTGTTGCAGAGCCCTG 442
Query 13957 TCAAGTGGAGGTACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGG 14016
| ||| | ||| | |||||| ||||| | || ||||| |||| |||||| |
Sbjct 443 TGCCATGGCGCTACGTCCTCAACACCTGCGGCACCGATTTCCCCATCAAAACCAACGCCG 502
Query 14017 AGATCGTGCGGGCGCTGAAGGCCCTGGGCGGCAAGAACGCCCTGGAG--AGCGAGGGCAT 14074
||||||| || | ||||||| ||| || |||| | ||||| || || | | |
Sbjct 503 AGATCGTCCGTGTCCTGAAGGTGCTGCAGGGGCGGAACAGCATGGAGTCAGAGAAGCCCT 562
Query 14075 GCCCAACCACAAGCTGCACCGCATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGTGGT 14134
| | ||||| | | || | || || ||| || || || ||
Sbjct 563 --CGGCCTTCAAGCGGGAGCG---CTGGCAGTACCAC----CATAAAGTGGGGGAGT--- 610
Query 14135 GGTCAAC-ACCGG-CAGGAACA-AGGCCCCGCCGCCGCTCAGGATC---CCCATCTTTGC 14188
||| | |||| ||| ||| || | ||| || | | | | ||||| || |
Sbjct 611 --TCATCTTCCGGACAGCCACAGAGAAACTGCCACCACCCCACAACTCTCCCATGTTCAC 668
Query 14189 GGGAAACGCTTACTTTGCGGTCACCCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGCC 14248
|| ||||| ||| | |||||| |||| |||||| | | || | || || |
Sbjct 669 AGGCAACGCGTACATCCTGGTCACGCGGGCCTTCGTGCAGCACATCTTTGAGAACCCCAC 728
Query 14249 GGTGGCCCTGCTCATGCACTGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGC 14308
|| | | | || | | ||| | ||||||| |||||||| ||||||||| | |||||
Sbjct 729 GGCGCAGCAGTTCCTCGAGTGGGCCAAGGACACCTACAGCCCTGACGAGCACGTCTGGGC 788
Query 14309 CACCGTGCAGAGAATGTACGGGACGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACAC 14368
|||| | | | ||| ||| ||| || | || || ||| ||||| | |
Sbjct 789 CACCCTCAACCGCATGCCCGGCGTGCCAGGCGCCATGCCGCAGAACGACAAGTTCCAGCT 848
Query 14369 CTCGGACATGTGGGCCAAGGTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAA 14428
|||||||||| ||| | | | | || |||||||| ||| ||||| || | ||
Sbjct 849 CTCGGACATGAACGCCTTGCCCCGCCTGGTGAAGTGGCAGTACCTGGAGGGCGACACCAG 908
Query 14429 GAAAGGGGCCCTGTACCCGCCTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGG 14488
|| || || | ||||| || ||| |||| ||| | |||| ||||||||| |||
Sbjct 909 CAAGGGCGCGCCCTACCCACCCTGCACCGGCCAGCACCAGCGCGCCGTCTGCATCTACGG 968
Query 14489 GTCCGGCGACGTGAAGTGGCTGAAG-AGCGTCCCGCACCTGTTCGCCAACAAGTTCGAC 14546
| ||||||||| ||| || | ||| | | ||||| || |||||||||||||||
Sbjct 969 GGTGGGCGACGTGCCCTGGATGCTGCAGCAGCAC-CACCTCTTGGCCAACAAGTTCGAC 1026
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658298742268160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |