Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balearica_20regulorum_20gibbericeps_20[refseq_20GCF_5F000709895.1_20
2014-06-25] 53,491 sequences; 1,127,622,302 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq32325 87.8 2e-12
>seq32325
Length=38855
Score = 87.8 bits (96), Expect = 2e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958
|| || || |||||||| ||||||||||| || || || || ||||| || ||||||||
Sbjct 36779 TATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCCCCCTCCTCT 36838
Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018
| | ||| ||| |||| ||||| || || || || || | ||| ||||| |||||
Sbjct 36839 CTGGTACTGAAACCCTGCTTATCCAGGAACTCACGTGATCCATTAGCATCCCAAATCTTT 36898
Query 7019 ACCCCCCGGGACGAGAGCTCCTT 7041
|| ||| | |||||||| ||
Sbjct 36899 ACACCCTTTGCAGAGAGCTCTTT 36921
Score = 87.8 bits (96), Expect = 2e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 34304 AAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTG 34363
|| |||||||| | ||| || ||||| ||||| ||| | || || || || || |||
Sbjct 36921 AAAGAGCTCTCTGCAAAGGGTGTAAAGATTTGGGATGCTAATGGATCACGTGAGTTCCTG 36862
Query 34364 GACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAG 34423
|| |||| ||| ||| | | |||||||| || ||||| || || || || ||||||
Sbjct 36861 GATAAGCAGGGTTTCAGTACCAGAGAGGAGGGGGATTTGGGACCAGTTTATGGTTTCCAG 36802
Query 34424 TGGAGACACTTTGGGGCGGAGTA 34446
||||| |||||||| || || ||
Sbjct 36801 TGGAGGCACTTTGGAGCAGAATA 36779
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447962674949520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |