Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balearica_20regulorum_20gibbericeps_20[refseq_20GCF_5F000709895.1_20
2014-06-25] 53,491 sequences; 1,127,622,302 total letters
Query= NC_029255.1
Length=129563
Score E
Sequences producing significant alignments: (Bits) Value
seq17761 109 5e-19
seq32325 87.8 1e-12
>seq17761
Length=8667
Score = 109 bits (120), Expect = 5e-19
Identities = 108/140 (77%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304
|| || || ||||| |||||||||||||| |||||||| | || || || ||||| |||
Sbjct 1642 GTGGTGGAGGAGCTGTTCCGAGATGGGGTTAACTGGGGCAGGATCGTGGCCTTCTTCGAG 1701
Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364
|| || ||||| ||||| ||||| |||||||| | | || | ||||||| |||| |
Sbjct 1702 TTCGGCGGTGTGATGTGCGTGGAGAGCGTCAACCGGGAGATGTCTCCCCTCGTGGACAGC 1761
Query 3365 ATTGCCGCGTGGATGACAGA 3384
|| ||| | |||||||| ||
Sbjct 1762 ATCGCCACCTGGATGACCGA 1781
>seq32325
Length=38855
Score = 87.8 bits (96), Expect = 1e-12
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593
|||||||| | || |||||||||||||| | || |||||||| | ||| |||||
Sbjct 33422 AGCCCTGTGACATGGGCAATCATGTATGTGAGCAGTGAATAGCTGGCAATATTGAAAGGC 33481
Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653
|| || || ||||| ||| | || ||||| || | ||||||||| | || || ||| |
Sbjct 33482 ACTCCTAGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACCATTTAGA 33541
Query 118654 ACATAAAACTG 118664
||||| |||||
Sbjct 33542 ACATAGAACTG 33552
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414206593636924
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |