Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balearica_20regulorum_20gibbericeps_20[refseq_20GCF_5F000709895.1_20
2014-06-25] 53,491 sequences; 1,127,622,302 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq32325 114 1e-20
seq28409 96.9 3e-15
>seq32325
Length=38855
Score = 114 bits (126), Expect = 1e-20
Identities = 125/166 (75%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 29713 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 29772
|||||| ||||| || || |||||||| ||||| || || |||||||| || || || ||
Sbjct 33421 TAGCCCTGTGACATGGGCAATCATGTATGTGAGCAGTGAATAGCTGGCAATATTGAAAGG 33480
Query 29773 CACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCT 29832
||| || || ||||| || || |||||||| ||||| ||||| || | || || |
Sbjct 33481 CACTCCTAGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACCATTTAG 33540
Query 29833 CACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGA 29878
|| || ||||| || | |||||||||||||| | ||||| |||
Sbjct 33541 AACATAGAACTGGCAAAGCGCATGGCACGGAGGCAAAGCCATCAGA 33586
Score = 95.1 bits (104), Expect = 1e-14
Identities = 125/167 (75%), Gaps = 5/167 (3%)
Strand=Plus/Plus
Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT-GTGCTCGAA 30075
|| |||||||||||||| || || || ||||||| || ||||| || || || || |||
Sbjct 36791 AAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCCCCCTCCTCTCTGGTACT-GAA 36849
Query 30076 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30135
||| ||| |||| || || | || || || || ||||| |||||||| ||||| |
Sbjct 36850 ACCCTGCTTATCCAGGAACTCACGTGATCCATTAGCATCCCAAATCTTTACACCCTTTGC 36909
Query 30136 GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAG-CAGC 30181
||||||||||| | ||||| || || || || || ||||| ||||
Sbjct 36910 AGAGAGCTCTTTAGCATTTGTAGAACC-CT-ACAAAACACAGACAGC 36954
>seq28409
Length=25514
Score = 96.9 bits (106), Expect = 3e-15
Identities = 86/108 (80%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 114284 TTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 114343
|| || ||||||||||| |||| || | |||||| | | ||| | |||||| || ||
Sbjct 2090 TTGAGGTCCCTGCTGAGCACTATATTAATTCTGTCTTTTAAAGGACGATTCTTCTCAGGA 2031
Query 114344 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391
||||||||||| ||||||||||||||||||| | ||||| ||||||
Sbjct 2030 ATGGAGAACCAGGTCTTTCTACCCATTATCAGTGCATTCTGTTTACCT 1983
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405898413452026
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |