Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balearica_20regulorum_20gibbericeps_20[refseq_20GCF_5F000709895.1_20
2014-06-25] 53,491 sequences; 1,127,622,302 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq32325 109 4e-19
>seq32325
Length=38855
Score = 109 bits (120), Expect = 4e-19
Identities = 123/165 (75%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 27207 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 27266
|||||| ||||| || || |||||||| ||||| || || |||||||| || || || ||
Sbjct 33421 TAGCCCTGTGACATGGGCAATCATGTATGTGAGCAGTGAATAGCTGGCAATATTGAAAGG 33480
Query 27267 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCT 27326
|| || || ||||| || || |||||||| ||||| || || || | || ||||
Sbjct 33481 CACTCCTAGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACCATTTAG 33540
Query 27327 TACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAG 27371
|| || ||||| || | || ||||||||||| | |||||| ||
Sbjct 33541 AACATAGAACTGGCAAAGCGCATGGCACGGAGGCAAAGCCATCAG 33585
Score = 107 bits (118), Expect = 1e-18
Identities = 141/189 (75%), Gaps = 5/189 (3%)
Strand=Plus/Plus
Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548
||| || |||| |||||||| || |||||||| ||||| || || || ||||||| ||
Sbjct 36769 CATATCTTTGTATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATC 36828
Query 27549 TCCCTCTTCCCTG-TGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 27607
||||| || ||| | || ||| ||| ||| |||| || || | || || || || |
Sbjct 36829 CCCCTCCTCTCTGGTACT-GAAACCCTGCTTATCCAGGAACTCACGTGATCCATTAGCAT 36887
Query 27608 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 27667
|||| |||||||| ||||| | ||||||||||| | ||||| || || || || || |
Sbjct 36888 CCCAAATCTTTACACCCTTTGCAGAGAGCTCTTTAGCATTTGTAGAACC-CT-ACAAAAC 36945
Query 27668 ACAG-CAGC 27675
|||| ||||
Sbjct 36946 ACAGACAGC 36954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369266310288821
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |