Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020
14-06-25] 62,257 sequences; 1,065,782,791 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq23237 113 3e-20
seq21600 104 2e-17
>seq23237
Length=6024
Score = 113 bits (124), Expect = 3e-20
Identities = 91/110 (83%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349
||| || ||| |||||||||| | |||||| ||| ||| ||||| || |||||||||||
Sbjct 2186 CTTGAGCTCCCTGCTGAGAACTATATTAATCCTGTTTTTCAAAGGACGATTCTTCTCAGG 2127
Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCTG 4399
||| |||||||| || ||||||||||| |||| | |||||||||| |||
Sbjct 2126 AATGGAGAACCAGGTTTTTTTACCCATTATCAGTGCATTCTGTTTACCTG 2077
>seq21600
Length=11202
Score = 104 bits (114), Expect = 2e-17
Identities = 135/183 (74%), Gaps = 3/183 (2%)
Strand=Plus/Plus
Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092
|||| ||||||||||| || ||||||||||| || ||||| || ||||| | |||||| |
Sbjct 8991 CTTTGTATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCTCCCT 9050
Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152
| |||||| |||||| | ||||| | || | |||||||| ||||||||||
Sbjct 9051 CTTCTCTGGTGCTAAAACCCTGCTTATCCAGGAACTCACGTGATCCATTAGCATCCCAAA 9110
Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACA-AC 102211
| | ||| || ||| || ||||||||| | ||||| || || | ||| |||| ||
Sbjct 9111 TCTTCACACCTTTTGCAGAGAGCTCTTTGGCATTTGTAGAACC-CT-ACAAAACACAGAC 9168
Query 102212 AGT 102214
|||
Sbjct 9169 AGT 9171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 360977098055507
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |