Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020 14-06-25] 62,257 sequences; 1,065,782,791 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq17102 120 4e-22 >seq17102 Length=2044 Score = 120 bits (132), Expect = 4e-22 Identities = 173/242 (71%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 83119 GGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCA 83178 |||| |||||| | || | | |||||||||||||||||||| | |||||||||||| Sbjct 247 GGGCACGCCGTCGGGGCCGATGAGGAACTTCTCGAAGTTCCAGGAGATGTCGTTGCGGCA 188 Query 83179 CACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGG 83238 || || |||||| ||| ||| |||| | ||| |||| | ||||||| || Sbjct 187 GACCGGGGACCAGATGATGTACTGCGGGTTGGTCATCAGCGAGGAGGGGTCGTCGTGCGG 128 Query 83239 CGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGC--CCTTGCACCGTTGACC 83296 ||||| |||||| || | || |||||| || || || |||| | |||| ||| Sbjct 127 GAAGGGCAGCGCCTCTTTCAGCAGGGTGAAGAGGGGGTGCGCGTCCTTCC--CGTTCACC 70 Query 83297 TCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTC 83356 || ||||||||||| | || || || |||| | | |||| ||| |||||||| | || | Sbjct 69 TCACACTTCTCGAACAAGATGAAATTGGGCTTGTACCCGTGCCCGGGACGGACATACTGC 10 Query 83357 AG 83358 || Sbjct 9 AG 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608323026720280