Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020
14-06-25] 62,257 sequences; 1,065,782,791 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq21600 104 2e-17
>seq21600
Length=11202
Score = 104 bits (114), Expect = 2e-17
Identities = 112/148 (76%), Gaps = 8/148 (5%)
Strand=Plus/Plus
Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461
|||||||||||||| |||||||| ||||| |||||||| ||||| | ||||| ||||||
Sbjct 8996 TATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCTCCCTCTTCT 9055
Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCT----AGATCCATTTGCATCCCAAAT 97517
|| | ||||| ||||||| |||| || |||||||| |||||||||||
Sbjct 9056 CTGGTGCTAAAACCCTGCTTATC----CAGGAACTCACGTGATCCATTAGCATCCCAAAT 9111
Query 97518 GTGCACACCAGATGCTGCAAGCTCTTTG 97545
| |||||| ||| | |||||||||
Sbjct 9112 CTTCACACCTTTTGCAGAGAGCTCTTTG 9139
Score = 89.7 bits (98), Expect = 4e-13
Identities = 123/172 (72%), Gaps = 0/172 (0%)
Strand=Plus/Plus
Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176
||||||||||| ||||| | || | || |||||||| ||||| || |||||||| |||
Sbjct 5025 GTGACATGGGCAATCATGTATGTGAGCAGTGAATAGCTGGCAATATTGAAAGGCACTCCT 5084
Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236
||||||||||| | || || ||||| | || || || | | |||| |||||
Sbjct 5085 AGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACCATTTAGAACATAG 5144
Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGA 97288
||||| | | |||| || || ||||| ||||| | |||||||| ||
Sbjct 5145 AACTGGCAAAGGGCATGGCATGGAGGCAAAGCCATCAGAGAAACATCTAGGA 5196
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346520875147490
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |