Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020
14-06-25] 62,257 sequences; 1,065,782,791 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq12919 93.3 8e-14
>seq12919
Length=70795
Score = 93.3 bits (102), Expect = 8e-14
Identities = 108/146 (74%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 52185 GGTACAGTTCCATATAGCTATAGGACATACTGCTATGTCCATTTACATAGATTGCCCGTT 52244
||| ||||||||| | |||| || || || || |||| ||||| || ||||| || ||
Sbjct 40405 GGTGCAGTTCCATGTGACTATTGGCCACACAGCCTTGTCTATTTATATTGATTGTCCCTT 40346
Query 52245 TCCAAAATGGATACAGTGGTCAGTTATTATCTATTCTATTAGTTTCATATTACTGTTTGG 52304
|| |||||||| || ||| || ||| ||||| || | | ||||| || || |||||
Sbjct 40345 CCCTAAATGGATGCACTGGGGTGTGATTTTCTATGCTGTCACCTTCATTTTCCTCTTTGG 40286
Query 52305 TAACTTCTATTTTAGAACATACAAGA 52330
||||||||| | | ||||| ||||
Sbjct 40285 TAACTTCTACTACCGGACATATAAGA 40260
Score = 89.7 bits (98), Expect = 9e-13
Identities = 101/133 (76%), Gaps = 2/133 (2%)
Strand=Plus/Minus
Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116
|| ||||||||||| ||| | ||| | ||||| ||||| || ||||| | ||||||||
Sbjct 40836 GCTTTTTTTGGAGCCCAGATGAATGCATTTATTCATGTCATAATGTATATGTATTATGGA 40777
Query 52117 ATGGCCGCTTGTGGTCCT-ATGTTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTAT 52175
| || || ||||| ||| | ||||| ||||| || |||||||| || || | || ||
Sbjct 40776 TTAGCTGCCTGTGGCCCTAAATTTCAG-AAGTACCTGTGGTGGAAGCGATACTTGACCAT 40718
Query 52176 AATGCAGTTGGTA 52188
| |||| ||||||
Sbjct 40717 ATTGCAATTGGTA 40705
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 922478356710280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |