Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020 14-06-25] 62,257 sequences; 1,065,782,791 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq21600 109 1e-18 seq1566 109 1e-18 >seq21600 Length=11202 Score = 109 bits (120), Expect = 1e-18 Identities = 126/168 (75%), Gaps = 4/168 (2%) Strand=Plus/Minus Query 111389 TACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGATGGAAATGGATCACG 111448 ||||||||| || || || | |||||| ||| || |||||||||| ||||||||||| Sbjct 9148 TACAAATGCCAAAGAGCTCTCTGCAAAAGGTGTGAAGATTTGGGATGCTAATGGATCACG 9089 Query 111449 TGACTTTCTAGAT--TCAGTTGGTCTTGTCGACAACGAAGAAGGTGATCTCGGACCAGTT 111506 ||| || || ||| ||| ||| || | || ||||| || ||| | ||||||||| Sbjct 9088 TGAGTTCCTGGATAAGCAG--GGTTTTAGCACCAGAGAAGAGGGAGATTTGGGACCAGTT 9031 Query 111507 TACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCAC 111554 || || || || ||| | |||||||| ||||| |||||| |||||| Sbjct 9030 TATGGTTTCCAGTGGAGGCACTTTGGAGCAGAATACAAAGATATGCAC 8983 >seq1566 Length=12574 Score = 109 bits (120), Expect = 1e-18 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || ||| |||| |||| || ||||| || ||||||| ||||| || |||||||| ||| Sbjct 3056 GCCCAGCAGCTCTGGTACGCTATCATTGAGTCGCAGACGGAGACCGGCACACCCTACATG 2997 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 | ||||| || || |||||||||||| |||||||||| |||| || || ||| | Sbjct 2996 GTCTACAAGGACTCCTGCAACCGCAAGAGCAACCAGCAGAACCTGGGGACCATTAAATGC 2937 Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263 ||||| ||||| || || || | || |||||| Sbjct 2936 AGCAATCTATGCACTGAAATCGTGGAGTACACC 2904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302313956784974