Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020
14-06-25] 62,257 sequences; 1,065,782,791 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq21600 109 1e-18
seq1566 109 1e-18
>seq21600
Length=11202
Score = 109 bits (120), Expect = 1e-18
Identities = 126/168 (75%), Gaps = 4/168 (2%)
Strand=Plus/Minus
Query 111389 TACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGATGGAAATGGATCACG 111448
||||||||| || || || | |||||| ||| || |||||||||| |||||||||||
Sbjct 9148 TACAAATGCCAAAGAGCTCTCTGCAAAAGGTGTGAAGATTTGGGATGCTAATGGATCACG 9089
Query 111449 TGACTTTCTAGAT--TCAGTTGGTCTTGTCGACAACGAAGAAGGTGATCTCGGACCAGTT 111506
||| || || ||| ||| ||| || | || ||||| || ||| | |||||||||
Sbjct 9088 TGAGTTCCTGGATAAGCAG--GGTTTTAGCACCAGAGAAGAGGGAGATTTGGGACCAGTT 9031
Query 111507 TACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCAC 111554
|| || || || ||| | |||||||| ||||| |||||| ||||||
Sbjct 9030 TATGGTTTCCAGTGGAGGCACTTTGGAGCAGAATACAAAGATATGCAC 8983
>seq1566
Length=12574
Score = 109 bits (120), Expect = 1e-18
Identities = 116/153 (76%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170
|| ||| |||| |||| || ||||| || ||||||| ||||| || |||||||| |||
Sbjct 3056 GCCCAGCAGCTCTGGTACGCTATCATTGAGTCGCAGACGGAGACCGGCACACCCTACATG 2997
Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230
| ||||| || || |||||||||||| |||||||||| |||| || || ||| |
Sbjct 2996 GTCTACAAGGACTCCTGCAACCGCAAGAGCAACCAGCAGAACCTGGGGACCATTAAATGC 2937
Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263
||||| ||||| || || || | || ||||||
Sbjct 2936 AGCAATCTATGCACTGAAATCGTGGAGTACACC 2904
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1302313956784974
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |