Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020 14-06-25] 62,257 sequences; 1,065,782,791 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq41089 114 2e-20 seq1566 98.7 1e-15 >seq41089 Length=22409 Score = 114 bits (126), Expect = 2e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742 |||| ||||| ||||| | ||| ||||| || || ||||| ||||| ||||| | ||| | Sbjct 10928 CCTCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCT 10869 Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802 | ||||||||||| | ||||| || || ||||| || || ||||| ||||| ||||||| Sbjct 10868 TCAGCCAAAATATAGCAGCAAAGGAACCCGAAAAAAAGATGCCTTCAACTGCAGCAAAGG 10809 Query 32803 CAATAAGTCTCTCTCC 32818 ||| | |||||| || Sbjct 10808 CAACCACTCTCTCACC 10793 >seq1566 Length=12574 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 63071 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGT 63130 |||| ||||| ||||||||||||||||| || |||| || |||||||||| || || Sbjct 4823 ACTCTCTTCATGAAGAGATCAGGAATCCAGAGGGCTAAGAAGAGATCTCTGGCTCGCTGC 4882 Query 63131 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 63190 ||||| || || || ||||| || || || || ||| | | || || ||||||||| Sbjct 4883 TCCTCCTTCCCAGTGTTCTTCTTTAGGTCAAGAAACTCAAAGATGTCCAGATGCCACGGC 4942 Query 63191 TCCAAGTATATGGC 63204 |||| ||| ||||| Sbjct 4943 TCCAGGTAAATGGC 4956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633138899657200