Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020
14-06-25] 62,257 sequences; 1,065,782,791 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq40441 168 1e-36
seq27582 163 5e-35
>seq40441
Length=3214
Score = 168 bits (186), Expect = 1e-36
Identities = 168/218 (77%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
||||||| || | ||| || |||||||| || |||||||| || || || || || |
Sbjct 827 AGGCGCAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGA 768
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| || ||||| || || || || || ||||| || |||||||||
Sbjct 767 CCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGGATGCCTTCC 708
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
||||| || ||||| ||||| ||| ||| |||||||| | || ||||||| ||||
Sbjct 707 TTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTAGGCTCAACTTCCAGGGTG 648
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || || || |||||||| || || ||||||||
Sbjct 647 ATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 610
Score = 154 bits (170), Expect = 3e-32
Identities = 165/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
||||||| || | ||| || |||||||| || |||||||| || || || || || |
Sbjct 599 AGGCGCAGCACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGA 540
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| || ||||| || || || || || ||||| ||||||||||||
Sbjct 539 CCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCC 480
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
||||| || ||||| ||||| || ||| |||||||| | || || || | |||
Sbjct 479 TTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGCGTG 420
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || || || |||||||| || || ||||||||
Sbjct 419 ATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 382
Score = 152 bits (168), Expect = 9e-32
Identities = 167/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
||||||| || | || || |||||||| || |||||||| || || || || || |
Sbjct 371 AGGCGCAGCACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGA 312
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| || ||||| || || || || || ||||| ||||||||||||
Sbjct 311 CCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCC 252
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
||||| || ||||| ||||| || ||| |||||||| | || || || | |||
Sbjct 251 TTGTCCTGGATCTTAGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGCGTG 192
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
||||| || || || |||||||| || || ||||||||| ||
Sbjct 191 ATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATTTTG 150
>seq27582
Length=3938
Score = 163 bits (180), Expect = 5e-35
Identities = 167/218 (77%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
||||||| || | ||| || |||||||| || |||||||| || ||||| || || |
Sbjct 2347 AGGCGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGT 2406
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| || || || || || || || || ||||| ||||||||||||
Sbjct 2407 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCC 2466
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
||||| || ||||| ||||| || |||||||||||| | || || || | ||||
Sbjct 2467 TTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCAACCTCGAGGGTG 2526
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || || || |||||||| || || ||||||||
Sbjct 2527 ATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 2564
Score = 163 bits (180), Expect = 5e-35
Identities = 167/218 (77%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| |||||||| || |||||||| || |||||||| |||||||| | || |
Sbjct 3259 AGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGACAAGGTGCGT 3318
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|| ||||| | |||||| || || || || || || || || ||||| ||||||||||||
Sbjct 3319 CCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCC 3378
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
||||| || ||||| ||||| || |||||||||||| | || ||||||| |||
Sbjct 3379 TTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCAACTTCCAGAGTG 3438
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || || || |||||||| || || ||||||||
Sbjct 3439 ATAGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 3476
Score = 159 bits (176), Expect = 6e-34
Identities = 166/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| |||||||| ||||||||||| || || ||||| || ||||| || || |
Sbjct 3031 AGACGCAGCACCAAGTGCAGCGTGGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGT 3090
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|| ||||| | |||||| || || || || || || || || || || ||||||||||||
Sbjct 3091 CCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATGCCTTCC 3150
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
||||| || ||||| ||||| || |||||||||||| | || ||||||| |||
Sbjct 3151 TTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCAACTTCCAGAGTG 3210
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || || || |||||||| || || ||||||||
Sbjct 3211 ATAGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 3248
Score = 159 bits (176), Expect = 6e-34
Identities = 166/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| |||||||| || |||||||| || |||||||| |||||||| | || |
Sbjct 3487 AGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGACAAGGTGCGT 3546
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|| ||||| | |||||| || || || || || || || || ||||| ||||||||||||
Sbjct 3547 CCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCC 3606
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
||||| || ||||| ||||| || ||| |||||||| | || || || | ||||
Sbjct 3607 TTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTG 3666
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || || || |||||||| || || ||||||||
Sbjct 3667 ATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 3704
Score = 154 bits (170), Expect = 3e-32
Identities = 165/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| || | ||| || |||||||| || |||||||| || ||||| || || |
Sbjct 2575 AGACGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGA 2634
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| || || || || || || || || || || ||||||||||||
Sbjct 2635 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATGCCTTCC 2694
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
||||| || ||||| ||||| || |||||||||||| | || ||||||| |||
Sbjct 2695 TTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCAACTTCCAGAGTG 2754
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || || || |||||||| || || ||||||||
Sbjct 2755 ATAGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 2792
Score = 147 bits (162), Expect = 4e-30
Identities = 158/208 (76%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
|||| || || |||||||| || |||||||| || ||||| || || | || ||||| |
Sbjct 2813 CAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCTTCCA 2872
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
|||||| || || || || || || || || ||||| ||||||||||||||||| || |
Sbjct 2873 GCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGGA 2932
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433
|||| ||||| || ||| |||||||| | || || || | ||||||||| || |
Sbjct 2933 TCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTGC 2992
Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461
| || |||||||| || || ||||||||
Sbjct 2993 CAGTCAGGGTCTTCACAAAGATCTGCAT 3020
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 920905181928040
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