Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020 14-06-25] 62,257 sequences; 1,065,782,791 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq27582 95.1 1e-14 >seq27582 Length=3938 Score = 95.1 bits (104), Expect = 1e-14 Identities = 91/114 (80%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || ||||| || |||||||||| || |||||| |||||||||||||||||| || | | Sbjct 3022 CCACCTCTGAGACGCAGCACCAAGTGCAGCGTGGACTCCTTCTGAATGTTGTAGTCGGAC 3081 Query 33961 A-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 | | || || |||| |||| |||||||| ||||| ||||| | ||||||||| Sbjct 3082 AGAGTG-CGTCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATC 3134 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || ||||| || |||||||||| || || ||| ||||||||| ||||||||||| | | Sbjct 3250 CCACCTCTGAGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGAC 3309 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 || || |||| |||| |||||||| ||||| ||||| | ||||||||| Sbjct 3310 AAGGTGCGTCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATC 3362 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || ||||| || |||||||||| || || ||| ||||||||| ||||||||||| | | Sbjct 3478 CCACCTCTGAGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGAC 3537 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 || || |||| |||| |||||||| ||||| ||||| | ||||||||| Sbjct 3538 AAGGTGCGTCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATC 3590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396761126050114