Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020
14-06-25] 62,257 sequences; 1,065,782,791 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq32132 104 9e-17
seq43 89.7 2e-12
seq27582 84.2 9e-11
>seq32132
Length=7406
Score = 104 bits (114), Expect = 9e-17
Identities = 107/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
|||||| |||| ||| | ||||| || || ||||||||||| | || || || || ||
Sbjct 6363 GTTACTAATGCTGTAGTGACTGTACCAGCCTATTTCAATGACTCTCAGCGCCAGGCTACA 6304
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
|||||||| ||| ||||| || | ||||| || |||||||| ||||| || |||||
Sbjct 6303 AAAGATGCTGGAACCATTGCAGGGCTCAATGTCCTGCGAATTATCAATGAGCCAACAGCT 6244
Query 451433 GCTGCTCTAGCATATGGACT 451452
||||| |||| ||||| ||
Sbjct 6243 GCTGCCATAGCCTATGGCCT 6224
>seq43
Length=48180
Score = 89.7 bits (98), Expect = 2e-12
Identities = 196/291 (67%), Gaps = 7/291 (2%)
Strand=Plus/Plus
Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379
|||| || || || || || ||||| |||||||| | || || || || || |||||||
Sbjct 389 ATGCTGTCATCACAGTGCCTGCTTACTTCAATGACTCCCAGCGCCAGGCCACCAAAGATG 448
Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439
| || || |||| | ||||| | || || || || || || |||||||||||
Sbjct 449 CTGGCACCATCACTGGCCTTAATGTGATGCGTATCATCAACGAGCCCACAGCAGCTGCGA 508
Query 451440 TAGCATATGGACTAGGAAAATCAAAAGAA-----ACAGAAGaaaaaaaTATTTTAGTATT 451494
|||| ||||| || ||| || ||| | | | | ||| || ||| | | | ||
Sbjct 509 TAGCCTATGG-CTTGGACAA-GAAAGGTACCCGGGCTGGAGAGAAGAATGTGCTCATCTT 566
Query 451495 TGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGA 451554
||| || || || || ||| ||| ||| | ||| | ||||| ||||| | |||||
Sbjct 567 TGACTTGGGAGGGGGCACTTTCGATGTATCTATCCTTACCATTGAGGATGGCATCTTTGA 626
Query 451555 AGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
|| ||| | || |||||| || ||||| || || || || |||| ||
Sbjct 627 GGTGAAGTCCACAGCTGGTGACACCCATCTGGGTGGGGAGGACTTTGACAA 677
>seq27582
Length=3938
Score = 84.2 bits (92), Expect = 9e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || || || || || |||||||| || ||||| ||||| || ||||| | |
Sbjct 3248 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACTATCACTCTGGAAGTTGAGCCCAGT 3189
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | ||| || | | || || || || || |||||||| ||||||||||||||
Sbjct 3188 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGATCAG 3129
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| | | || || | || || || || ||||| ||| | ||| || | || || ||
Sbjct 3128 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGACGGACGCACTCTGTCCGACTACAAC 3069
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258
||| | ||||| | || || ||||| ||
Sbjct 3068 ATTCAGAAGGAGTCCACGCTGCACTTGGT 3040
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1974142433025756
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |