Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020
14-06-25] 62,257 sequences; 1,065,782,791 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq43 100 2e-15
>seq43
Length=48180
Score = 100 bits (110), Expect = 2e-15
Identities = 272/410 (66%), Gaps = 6/410 (1%)
Strand=Plus/Minus
Query 517265 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 517324
|| || || |||||||||||||| | ||||| ||||| || || || ||||| || |
Sbjct 1436 ACGTTCAGGATACCATTGGCATCGATGTCAAAAGTGACCTCGATCTGGGGGACTCCACGG 1377
Query 517325 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 517384
| || || ||||| || | | ||| | ||||| || || || || || |
Sbjct 1376 GGTGCCGGGGGGATGCCCGTTAGGTCGAATTTGCCCAGCAAGTTGTTGTCCTTCGTCATG 1317
Query 517385 TTTCGTTCACCCTCGAAAATTTGGAT-AGTA-ACTACAGTTTGATTATCTGAATAAGTTG 517442
| ||||||||| | | |||| || | ||| | | || || || || || || |
Sbjct 1316 GCCCTCTCACCCTCGTACACCTGGACCAGGACACTGC--TCTGGTTGTCCGAGTAGGTGG 1259
Query 517443 TAAATACTCTGGATTT-TTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATA 517501
| || |||| ||| ||| ||||| || ||||| | | || | | ||||||
Sbjct 1258 TGAAGG-TCTGAGTTTGTTTGGTGGGAATGGTGGTGTTGCGCTTGATGAGAGCGGTCATC 1200
Query 517502 ATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTT 517561
| ||||| ||||| || | || || || |||||||||||||| | || | | ||
Sbjct 1199 ACTCCACCAGCTGTCTCGATGCCCAGGGACAGAGGAGTGACATCCAGCAGCAGGAGATCC 1140
Query 517562 TGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCA 517621
|| | || ||| | | || | || ||||||||||| | ||||||||||| |||
Sbjct 1139 TGCACATTCTCAGACTTGTCTCCCATGAGGATAGCTGCTTGCACGGCAGCACCATAAGCA 1080
Query 517622 ACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAA 517671
||||| |||||||| || | ||| || || | ||| |||||||| ||
Sbjct 1079 ACAGCCTCATCAGGGTTGATGCTTTTGTTGAGCTCTTTGCCATTGAAGAA 1030
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3777733002585442
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |