Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020 14-06-25] 62,257 sequences; 1,065,782,791 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq32132 178 2e-39 seq34505 86.0 8e-12 >seq32132 Length=7406 Score = 178 bits (196), Expect = 2e-39 Identities = 367/543 (68%), Gaps = 6/543 (1%) Strand=Plus/Plus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || || || || || || ||||| || || || | || ||||| ||||| || || || Sbjct 5558 GCACCATAAGCCACAGCTTCATCAGGATTGATGCTCTTGTTCAGCTCTTTGCCATTGAAG 5617 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 ||||| | || | ||||| || ||||| || || || ||||| |||| ||||| Sbjct 5618 AAATCCTGCAGCAGCTTCTGAATCTTTGGGATACGAGTAGACCCACCCACCAGCACGATG 5677 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 |||| | | |||||| |||| ||| | || || || | ||||| ||||| |||| Sbjct 5678 TCATGGATCTGCGATTTGTCGAGCTTGGCATCCCGCAGGGCCTTTTCCACAGGGTCCAGG 5737 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 ||||||| ||| ||| || || || || || | ||| |||||||| ||| Sbjct 5738 GTGCCGCGGAACAGGTCAGCGTTCAGCTCTTCGAAGCGAGCTCTGGTGATGGATGTGTAG 5797 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || |||| || || || | ||||| ||||| || | | |||| | || || | Sbjct 5798 AAGTCAATTCCCTCATAGAGAGAATCGATTTCGATACTGGCCTGTGTGCTGGAGGACAGA 5857 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || ||||| || ||||| || || || || | ||||| | || | | ||| || Sbjct 5858 GTACGCTTCGCACGCTCGCAGGCAGTGCGGAGGCGACGCACTGCTCTCTTGTTCTCGCTG 5917 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGA--AGGAGTCTCGAA 7456 || |||||||| || || || || || || || |||||| | || | | | | Sbjct 5918 ATGTCTTTCTTGTGCTTGCGCTTGAATTCAGCAATGAAGTGGTTGACCATGCGGTTG--- 5974 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || ||||| ||||||||||| || || || || || | ||| || || ||||| || Sbjct 5975 TCAAAGTCTTCTCCACCCAAGTGGGTGTCACCTGCAGTGGATTTCACCTCGAAGATGCCG 6034 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 ||||||| | || | || ||||| || || ||||| || |||||||| ||||| ||| Sbjct 6035 TCTTCAATAGTCAAAATTGACACATCGAAGGTGCCACCCCCAAGGTCAAAGATGAGAACG 6094 Query 7577 TTC 7579 ||| Sbjct 6095 TTC 6097 >seq34505 Length=7081 Score = 86.0 bits (94), Expect = 8e-12 Identities = 118/164 (72%), Gaps = 6/164 (4%) Strand=Plus/Plus Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTT---TGGTTC 7993 || || || |||||||| ||||| || ||||| | |||||| || ||| |||||| Sbjct 6755 CCAATGAGCCGCTTTGCGTCAAACACAGTGTTCTCGGGGTT---GGATGTAAGCTGGTTC 6811 Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053 || || ||||||||||| | || || | ||| ||||| ||||| || || || Sbjct 6812 TTGGCAGCGTCCCCGATCAAGCGCTCTCCCTCAGGCGTGAACGCCACGTAGGACGGCGTG 6871 Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTT 8097 | || ||||| ||||| || ||||| ||||| || ||| |||| Sbjct 6872 ATGCGGTTCCCCTGGTCATTGGCAATGATTTCCACACGGCCGTT 6915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634638531715880