Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020
14-06-25] 62,257 sequences; 1,065,782,791 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq32132 178 2e-39
seq34505 86.0 8e-12
>seq32132
Length=7406
Score = 178 bits (196), Expect = 2e-39
Identities = 367/543 (68%), Gaps = 6/543 (1%)
Strand=Plus/Plus
Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099
|| || || || || || ||||| || || || | || ||||| ||||| || || ||
Sbjct 5558 GCACCATAAGCCACAGCTTCATCAGGATTGATGCTCTTGTTCAGCTCTTTGCCATTGAAG 5617
Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159
||||| | || | ||||| || ||||| || || || ||||| |||| |||||
Sbjct 5618 AAATCCTGCAGCAGCTTCTGAATCTTTGGGATACGAGTAGACCCACCCACCAGCACGATG 5677
Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219
|||| | | |||||| |||| ||| | || || || | ||||| ||||| ||||
Sbjct 5678 TCATGGATCTGCGATTTGTCGAGCTTGGCATCCCGCAGGGCCTTTTCCACAGGGTCCAGG 5737
Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279
||||||| ||| ||| || || || || || | ||| |||||||| |||
Sbjct 5738 GTGCCGCGGAACAGGTCAGCGTTCAGCTCTTCGAAGCGAGCTCTGGTGATGGATGTGTAG 5797
Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339
|| |||| || || || | ||||| ||||| || | | |||| | || || |
Sbjct 5798 AAGTCAATTCCCTCATAGAGAGAATCGATTTCGATACTGGCCTGTGTGCTGGAGGACAGA 5857
Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399
|| ||||| || ||||| || || || || | ||||| | || | | ||| ||
Sbjct 5858 GTACGCTTCGCACGCTCGCAGGCAGTGCGGAGGCGACGCACTGCTCTCTTGTTCTCGCTG 5917
Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGA--AGGAGTCTCGAA 7456
|| |||||||| || || || || || || || |||||| | || | | | |
Sbjct 5918 ATGTCTTTCTTGTGCTTGCGCTTGAATTCAGCAATGAAGTGGTTGACCATGCGGTTG--- 5974
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|| || ||||| ||||||||||| || || || || || | ||| || || ||||| ||
Sbjct 5975 TCAAAGTCTTCTCCACCCAAGTGGGTGTCACCTGCAGTGGATTTCACCTCGAAGATGCCG 6034
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
||||||| | || | || ||||| || || ||||| || |||||||| ||||| |||
Sbjct 6035 TCTTCAATAGTCAAAATTGACACATCGAAGGTGCCACCCCCAAGGTCAAAGATGAGAACG 6094
Query 7577 TTC 7579
|||
Sbjct 6095 TTC 6097
>seq34505
Length=7081
Score = 86.0 bits (94), Expect = 8e-12
Identities = 118/164 (72%), Gaps = 6/164 (4%)
Strand=Plus/Plus
Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTT---TGGTTC 7993
|| || || |||||||| ||||| || ||||| | |||||| || ||| ||||||
Sbjct 6755 CCAATGAGCCGCTTTGCGTCAAACACAGTGTTCTCGGGGTT---GGATGTAAGCTGGTTC 6811
Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053
|| || ||||||||||| | || || | ||| ||||| ||||| || || ||
Sbjct 6812 TTGGCAGCGTCCCCGATCAAGCGCTCTCCCTCAGGCGTGAACGCCACGTAGGACGGCGTG 6871
Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTT 8097
| || ||||| ||||| || ||||| ||||| || ||| ||||
Sbjct 6872 ATGCGGTTCCCCTGGTCATTGGCAATGATTTCCACACGGCCGTT 6915
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 634638531715880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |