Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020 14-06-25] 62,257 sequences; 1,065,782,791 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1566 95.1 1e-14 seq35559 86.0 7e-12 >seq1566 Length=12574 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 106492 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCC 106551 ||||||||| |||||||| | ||||| || || | ||| | ||||| ||||| Sbjct 2892 CTCATCCTTGCTGGTGTACTCCACGATTTCAGTGCATAGATTGCTGCATTTAATGGTCCC 2951 Query 106552 CAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 106611 || |||| ||||| ||||| |||||| | |||||||||| ||||||||| || || Sbjct 2952 CAGGTTCTGCTGGTTGCTCTTGCGGTTGCAGGAGTCCTTGTAGACCATGTAGGGTGTGCC 3011 Query 106612 CGTCTCCGTCTGTGACT 106628 ||||||||||| |||| Sbjct 3012 GGTCTCCGTCTGCGACT 3028 >seq35559 Length=19442 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 116985 ATAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCAT 117044 ||| || || |||||||||||||||||||||||||| || || || ||||||||||| Sbjct 4194 ATATTCACCTACTCGCTTCTCAAAGAAGTTGGTCTTGCCTTCCAGAGAGATGTTTTCCAT 4135 Query 117045 AAAGTCAAATGGATTCT 117061 |||||||| ||||||| Sbjct 4134 GAAGTCAAAAGGATTCT 4118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589521669566680