Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020
14-06-25] 62,257 sequences; 1,065,782,791 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq40441 129 1e-24
seq27582 127 5e-24
>seq40441
Length=3214
Score = 129 bits (142), Expect = 1e-24
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|||||||| || |||||||| || || || ||||| || | || || | ||||||||
Sbjct 818 ACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGACCATCTTCC 759
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| || | || || || || || |||||||| ||||| ||
Sbjct 758 AGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGGATGCCTTCCTTGTCCTGG 699
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| ||||||||||||||||| | || ||||| ||||| | |||||
Sbjct 698 ATCTTGGCCTTCACGTTCTCAATGGTGTCACTAGGCTCAACTTCCAGGGTGATGGTCTTG 639
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| |||| || || || || | |||||
Sbjct 638 CCAGTCAGGGTCTTCACAAAGATCTGCAT 610
Score = 127 bits (140), Expect = 5e-24
Identities = 156/212 (74%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
||||||||||| |||||||| || || || ||||| || | || || | ||||||||
Sbjct 590 ACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGACCATCTTCC 531
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| || | || || || || ||||||||||| ||||| ||
Sbjct 530 AGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGG 471
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108
|| || ||| || |||||||||||||| ||| || || ||||| || | |||
Sbjct 470 ATCTTGGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCAACCTCAAGCGTGATGGTC 414
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || |||| || || || || | |||||
Sbjct 413 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 382
Score = 116 bits (128), Expect = 8e-21
Identities = 155/214 (72%), Gaps = 6/214 (3%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || || |||||||| || || || ||||| || | || || | ||||||||
Sbjct 362 ACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGACCATCTTCC 303
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| || | || || || || ||||||||||| ||||| ||
Sbjct 302 AGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGG 243
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108
|| || ||| || |||||||||||||| ||| || || ||||| || | |||
Sbjct 242 ATCTTAGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCAACCTCAAGCGTGATGGTC 186
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142
|| || |||| || || || || | |||||||
Sbjct 185 TTGCCAGTCAGGGTCTTCACAAAGATCTGCATTT 152
>seq27582
Length=3938
Score = 127 bits (140), Expect = 5e-24
Identities = 156/212 (74%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|||||||| || |||||||| || || || ||||| |||| ||||| | ||||||||
Sbjct 2356 ACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCTTCC 2415
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || ||||| || | || || || |||||||||||||| ||||| ||
Sbjct 2416 AGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGG 2475
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108
|| || ||| || ||||| |||||||| ||| || || || ||||| | |||
Sbjct 2476 ATCTTGGCCTTCACATTCTCGATGGTGTC---ACTGGGCTCAACCTCGAGGGTGATGGTC 2532
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || |||| || || || || | |||||
Sbjct 2533 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 2564
Score = 127 bits (140), Expect = 5e-24
Identities = 164/225 (73%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|||||| | || |||||||| || |||||||| || || || ||||| |||| || ||
Sbjct 2571 TCTGAGACGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGT 2630
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| |||||||| |||||||| || || ||||| || | || || || |||||||||||
Sbjct 2631 ACGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATGCC 2690
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095
||| ||||| || || || ||| || ||||| |||||||| ||| || |||||
Sbjct 2691 TTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTC---ACTGGGCTCAACTTC 2747
Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | ||||| || |||| || || || || | |||||
Sbjct 2748 CAGAGTGATAGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 2792
Score = 123 bits (136), Expect = 6e-23
Identities = 163/225 (72%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|||||| | || || | ||| || |||||||| || ||||| ||||| |||| |||||
Sbjct 3027 TCTGAGACGCAGCACCAAGTGCAGCGTGGACTCCTTCTGAATGTTGTAGTCGGACAGAGT 3086
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| || ||||| |||||||| || || ||||| || | || || || |||||||||||
Sbjct 3087 GCGTCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATGCC 3146
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095
||| ||||| || || || ||| || ||||| |||||||| ||| || |||||
Sbjct 3147 TTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTC---ACTGGGCTCAACTTC 3203
Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | ||||| || |||| || || || || | |||||
Sbjct 3204 CAGAGTGATAGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 3248
Score = 122 bits (134), Expect = 2e-22
Identities = 155/212 (73%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
||||| || || |||||||| || || || ||||| |||| ||||| | || |||||
Sbjct 2812 ACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCTTCC 2871
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || ||||| || | || || || |||||||||||||| ||||| ||
Sbjct 2872 AGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGG 2931
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108
|| || ||| || |||||||||||||| ||| || || || ||||| | |||
Sbjct 2932 ATCTTGGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCAACCTCGAGGGTGATGGTC 2988
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || |||| || || || || | |||||
Sbjct 2989 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 3020
Score = 122 bits (134), Expect = 2e-22
Identities = 165/226 (73%), Gaps = 8/226 (4%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
|||||| | || || | ||| || |||||||| || || || |||||||||| |||| |
Sbjct 3483 TCTGAGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGACAAG-G 3541
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
| | || ||||| |||||||| || || ||||| || | || || || ||||||||||
Sbjct 3542 TGCGTCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGC 3601
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTT 195094
|||| ||||| || || || ||| || |||||||||||||| ||| || || |
Sbjct 3602 CTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCAACCT 3658
Query 195095 CAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| ||||| | ||||| || |||| || || || || | |||||
Sbjct 3659 CGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 3704
Score = 118 bits (130), Expect = 2e-21
Identities = 164/226 (73%), Gaps = 8/226 (4%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
|||||| | || || | ||| || |||||||| || || || |||||||||| |||| |
Sbjct 3255 TCTGAGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGACAAG-G 3313
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
| | || ||||| |||||||| || || ||||| || | || || || ||||||||||
Sbjct 3314 TGCGTCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGC 3373
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTT 195094
|||| ||||| || || || ||| || ||||| |||||||| ||| || ||||
Sbjct 3374 CTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTC---ACTGGGCTCAACTT 3430
Query 195095 CAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| || || | ||||| || |||| || || || || | |||||
Sbjct 3431 CCAGAGTGATAGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 3476
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1108596602239119
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