Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020
14-06-25] 62,257 sequences; 1,065,782,791 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq35559 111 2e-19
seq41089 102 9e-17
>seq35559
Length=19442
Score = 111 bits (122), Expect = 2e-19
Identities = 100/126 (79%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042
|||| ||||| || || | |||||||||||| || | |||||||| | ||||||||| |
Sbjct 2945 CCTCATCTCTGCTGATGAGTTCATTAGAAAAAGTGAGCCCAGGCATTAATCCTCTTTTCT 2886
Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102
| | ||| || || || ||||| || ||||| ||||| || ||||| ||||||||||| |
Sbjct 2885 TCAGCCAAAAAATTGATGCAAAAGAGCCAGAGAAGAAGATTCCTTCCACTGCTGCAAACG 2826
Query 19103 CAACTA 19108
| ||||
Sbjct 2825 CTACTA 2820
>seq41089
Length=22409
Score = 102 bits (112), Expect = 9e-17
Identities = 104/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042
|||| ||||| || || | |||||| || || || | ||||||||||| || || || |
Sbjct 10928 CCTCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCT 10869
Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102
| | ||| ||||||| |||||| || || ||||| || || ||||| ||||| ||||| |
Sbjct 10868 TCAGCCAAAATATAGCAGCAAAGGAACCCGAAAAAAAGATGCCTTCAACTGCAGCAAAGG 10809
Query 19103 CAACTAGTCTTTCTCC 19118
|||| | ||| || ||
Sbjct 10808 CAACCACTCTCTCACC 10793
Score = 84.2 bits (92), Expect = 2e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 19345 ACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATA 19404
|||| |||||||| || ||||||||||| |||||||||||||| | |||||| |||
Sbjct 5515 ACCAGGTTTTCATTTACAATTCCATCACTGGCTGCAAAAAATGCCAGAACATGTGAGATA 5456
Query 19405 AAATGTTTTTCATCTG 19420
|| |||||||||||||
Sbjct 5455 AAGTGTTTTTCATCTG 5440
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 561671359905480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |