Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020
14-06-25] 62,257 sequences; 1,065,782,791 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq32132 125 6e-23
seq27582 91.5 1e-12
>seq32132
Length=7406
Score = 125 bits (138), Expect = 6e-23
Identities = 116/147 (79%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450
||||| |||| ||| | ||||||||||| ||||| |||||||| || || || |||||
Sbjct 6363 GTTACTAATGCTGTAGTGACTGTACCAGCCTATTTCAATGACTCTCAGCGCCAGGCTACA 6304
Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510
|||||||||||| ||||| || || ||||| || || ||||||||||| || || |||
Sbjct 6303 AAAGATGCTGGAACCATTGCAGGGCTCAATGTCCTGCGAATTATCAATGAGCCAACAGCT 6244
Query 550511 GCTGCACTTGCATATGGACTTGATAAA 550537
||||| | || ||||| || || |||
Sbjct 6243 GCTGCCATAGCCTATGGCCTGGACAAA 6217
>seq27582
Length=3938
Score = 91.5 bits (100), Expect = 1e-12
Identities = 155/223 (70%), Gaps = 4/223 (2%)
Strand=Plus/Plus
Query 563254 CTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAG 563311
|||||||| || ||||| || ||||| ||| | ||| || ||||| || | || |
Sbjct 2572 CTGAGACGCAGCACAAGGTGCAGGGTGGACTCCTTCTGG--ATGTTGTAGTCGGACAGGG 2629
Query 563312 TTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTC 563371
| | |||||| || || || || ||||| || || || ||||||||||||||||| |
Sbjct 2630 TACGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATGC 2689
Query 563372 CTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGA 563431
|||| || || || || || || || ||| || || ||| || | | ||| |
Sbjct 2690 CTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCAACTTCCA 2749
Query 563432 GAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|||| | ||| || ||||| || || || || || || |||||
Sbjct 2750 GAGTGATAGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 2792
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4026003569060930
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |