Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020
14-06-25] 62,257 sequences; 1,065,782,791 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq21600 114 1e-20
seq23237 96.9 3e-15
>seq21600
Length=11202
Score = 114 bits (126), Expect = 1e-20
Identities = 139/184 (76%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209
||| || |||| |||||||| || |||||||||||||| || || || ||||||| ||
Sbjct 8986 CATATCTTTGTATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATC 9045
Query 30210 TCCCTCTTCCCT-GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 30268
||||||||| || ||||| || ||| ||| |||| || || | || || || || |
Sbjct 9046 TCCCTCTTCTCTGGTGCT-AAAACCCTGCTTATCCAGGAACTCACGTGATCCATTAGCAT 9104
Query 30269 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 30328
|||| ||||| || || || | ||||||||||||| ||||| || || || || || |
Sbjct 9105 CCCAAATCTTCACACCTTTTGCAGAGAGCTCTTTGGCATTTGTAGAACC-CT-ACAAAAC 9162
Query 30329 ACAG 30332
||||
Sbjct 9163 ACAG 9166
>seq23237
Length=6024
Score = 96.9 bits (106), Expect = 3e-15
Identities = 86/108 (80%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 112102 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 112161
|| |||||||||||||| |||| || ||||||| | ||| ||| | |||||| || ||
Sbjct 2185 TTGAGCTCCCTGCTGAGAACTATATTAATCCTGTTTTTCAAAGGACGATTCTTCTCAGGA 2126
Query 112162 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209
||||||||||| || ||| |||||||||||| | ||||| || |||
Sbjct 2125 ATGGAGAACCAGGTTTTTTTACCCATTATCAGTGCATTCTGTTTACCT 2078
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408307558459061
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |