Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020 14-06-25] 62,257 sequences; 1,065,782,791 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq23398 242 4e-59 seq59352 95.1 1e-14 >seq23398 Length=123290 Score = 242 bits (268), Expect = 4e-59 Identities = 605/910 (66%), Gaps = 9/910 (1%) Strand=Plus/Plus Query 160045 TGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATT 160104 ||||||||| || || |||| ||||| || || || |||||| || ||| || | Sbjct 119180 TGTGTCGCAAATACTCTTCCAAACATTTCACAGCAAAAGGGTCAACATCAGTGTCAAACT 119239 Query 160105 TATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACA 160164 |||| || || | ||||| ||| |||| ||||||| || |||||| |||||| | Sbjct 119240 TATTAGCAAAGAAGTGGTG---GTTTCGTAGCATCCAGTTCAGGTCTCCCACCCCGAAAA 119296 Query 160165 CGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGT 160224 | ||||| || || | || || || |||| || ||||| | || ||||| | ||||| Sbjct 119297 CACAGACAGAGCGAAGATGAACTCCACTGCACGGTGGGTAGGGGGCACCTTTGGACACGT 119356 Query 160225 CACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGT 160284 ||||||| ||||||||||||| | |||||||| | ||| | |||||| || || | Sbjct 119357 CACCTTCAAAGTACTGCCACTTGATAAACCTGGGCAGCGCGTTCATGTCAGAAACATCAT 119416 Query 160285 ATTTGTACATCAG-GGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343 | ||| || || ||||| ||||| || || | || || | ||| | || ||||| Sbjct 119417 ACTTG-GCACTAGACGGAACCGCACCTGGGACTTCAGGGATTCTCTGAATTGTTGCCCAG 119475 Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTG 160403 |||| || || |||||||| ||||| || | ||| || ||||| | ||| ||| Sbjct 119476 AGGTACTCATCTGGGCTGTAAGTGTCTTTTGCCCACTCAATGAATTTAAGTATTGTGCTG 119535 Query 160404 -TCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAA 160462 | | || | || || | |||| | || ||||| || || || || || || Sbjct 119536 CTTTCTAAG-ATGTACTCTACAAATCTTCTGCTAACTACAAAATAGGCACTACCAGAAAA 119594 Query 160463 TATCGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTT 160522 || || | | ||| || | |||||| || ||||| | | || | Sbjct 119595 AATTGGAGTACTGAGAGGTGGTAGTTGTTTGTCTGTGCCCGTGTTCTTTATCTTGCCATC 119654 Query 160523 CACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTC 160582 | | | | || ||||||||||||| || |||| | ||||| |||||| || Sbjct 119655 AATAATCTCATGGTGCTTCTTCCACCTTACTTCTTTGTTAGCCGGCATTTTTTCCGTTTC 119714 Query 160583 TAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAG 160642 | ||||| ||| | || | ||| | | || || || || |||| ||||| | Sbjct 119715 CAAGCTGTTCATACCTTTAAGGGCTTTTAATTTCTCTACCATTTCCTGGTTGGTCTTTAT 119774 Query 160643 CGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAG 160702 |||||||| | || || | |||||| | ||| ||||| || | | | || || Sbjct 119775 AGGAAAGTCCATGCCACAGAGGTTTATTAGGTATTTCCAGTTTGAATTTCGCCTGTAGAG 119834 Query 160703 GTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTC 160762 ||| ||||||| ||||| || |||||||| | |||||| ||||| || || || |||| Sbjct 119835 GTCTTTCATGCAGTTAATGTCCGCCTGCACCCTGCTCCATGAAGCATATACAACACTCTC 119894 Query 160763 TAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAA 160822 || | |||| | |||||| ||||| ||||| || || |||||| ||| ||| | || Sbjct 119895 TAACTGGCTGGAAATAAAGACATTATCAAAACATGAGACTATTCCCTTCACAGCC-GCAA 119953 Query 160823 GAACATCTTAT-CCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGA 160881 || | || | | |||| ||| || || | || || | |||||||| || |||| Sbjct 119954 AAAAAGATTCTGGAGACTTTTTGTCAACATGAATACAGTAAAAATTCTGAGGGGCATAGA 120013 Query 160882 TGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTA 160941 | | || || | || || | |||||| || || |||| | ||| || ||||| || | Sbjct 120014 TTGATCTTAGAAGTCTGTCAAGCATCTCAATTTTGTGATAAACCACTATTGAGTACGCAA 120073 Query 160942 TCGGAAACTC 160951 | ||||| || Sbjct 120074 TTGGAAATTC 120083 >seq59352 Length=547 Score = 95.1 bits (104), Expect = 1e-14 Identities = 120/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 160223 GTCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTC 160282 |||||| || |||||||||||| || | | || | || | |||||| ||| || Sbjct 53 GTCACCCTCCAGGTACTGCCACTTGACCAGGCGGGGCAGGGCGTTCATGTCCGAGAGGTG 112 Query 160283 GTATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCA 160342 | | |||| | |||| ||||| || || ||||| ||||| || | ||||||||||| Sbjct 113 GAACTTGTCGTTGGGGGGCACGGCGCCCGGCACGCCAGGCATGCGATTGAGGGTGGCCCA 172 Query 160343 CAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAA 160387 | ||| ||||| |||||||| |||||||| | ||| || | ||| Sbjct 173 GACGTGCTCGTCAGGGCTGTAGGTGTCCTTGGCCCACTCGAGGAA 217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576770000803320