Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020
14-06-25] 62,257 sequences; 1,065,782,791 total letters
Query= NC_020474.2
Length=180421
Score E
Sequences producing significant alignments: (Bits) Value
seq23398 242 4e-59
seq59352 95.1 1e-14
>seq23398
Length=123290
Score = 242 bits (268), Expect = 4e-59
Identities = 605/910 (66%), Gaps = 9/910 (1%)
Strand=Plus/Plus
Query 160045 TGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATT 160104
||||||||| || || |||| ||||| || || || |||||| || ||| || |
Sbjct 119180 TGTGTCGCAAATACTCTTCCAAACATTTCACAGCAAAAGGGTCAACATCAGTGTCAAACT 119239
Query 160105 TATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACA 160164
|||| || || | ||||| ||| |||| ||||||| || |||||| |||||| |
Sbjct 119240 TATTAGCAAAGAAGTGGTG---GTTTCGTAGCATCCAGTTCAGGTCTCCCACCCCGAAAA 119296
Query 160165 CGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGT 160224
| ||||| || || | || || || |||| || ||||| | || ||||| | |||||
Sbjct 119297 CACAGACAGAGCGAAGATGAACTCCACTGCACGGTGGGTAGGGGGCACCTTTGGACACGT 119356
Query 160225 CACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGT 160284
||||||| ||||||||||||| | |||||||| | ||| | |||||| || || |
Sbjct 119357 CACCTTCAAAGTACTGCCACTTGATAAACCTGGGCAGCGCGTTCATGTCAGAAACATCAT 119416
Query 160285 ATTTGTACATCAG-GGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343
| ||| || || ||||| ||||| || || | || || | ||| | || |||||
Sbjct 119417 ACTTG-GCACTAGACGGAACCGCACCTGGGACTTCAGGGATTCTCTGAATTGTTGCCCAG 119475
Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTG 160403
|||| || || |||||||| ||||| || | ||| || ||||| | ||| |||
Sbjct 119476 AGGTACTCATCTGGGCTGTAAGTGTCTTTTGCCCACTCAATGAATTTAAGTATTGTGCTG 119535
Query 160404 -TCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAA 160462
| | || | || || | |||| | || ||||| || || || || || ||
Sbjct 119536 CTTTCTAAG-ATGTACTCTACAAATCTTCTGCTAACTACAAAATAGGCACTACCAGAAAA 119594
Query 160463 TATCGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTT 160522
|| || | | ||| || | |||||| || ||||| | | || |
Sbjct 119595 AATTGGAGTACTGAGAGGTGGTAGTTGTTTGTCTGTGCCCGTGTTCTTTATCTTGCCATC 119654
Query 160523 CACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTC 160582
| | | | || ||||||||||||| || |||| | ||||| |||||| ||
Sbjct 119655 AATAATCTCATGGTGCTTCTTCCACCTTACTTCTTTGTTAGCCGGCATTTTTTCCGTTTC 119714
Query 160583 TAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAG 160642
| ||||| ||| | || | ||| | | || || || || |||| ||||| |
Sbjct 119715 CAAGCTGTTCATACCTTTAAGGGCTTTTAATTTCTCTACCATTTCCTGGTTGGTCTTTAT 119774
Query 160643 CGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAG 160702
|||||||| | || || | |||||| | ||| ||||| || | | | || ||
Sbjct 119775 AGGAAAGTCCATGCCACAGAGGTTTATTAGGTATTTCCAGTTTGAATTTCGCCTGTAGAG 119834
Query 160703 GTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTC 160762
||| ||||||| ||||| || |||||||| | |||||| ||||| || || || ||||
Sbjct 119835 GTCTTTCATGCAGTTAATGTCCGCCTGCACCCTGCTCCATGAAGCATATACAACACTCTC 119894
Query 160763 TAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAA 160822
|| | |||| | |||||| ||||| ||||| || || |||||| ||| ||| | ||
Sbjct 119895 TAACTGGCTGGAAATAAAGACATTATCAAAACATGAGACTATTCCCTTCACAGCC-GCAA 119953
Query 160823 GAACATCTTAT-CCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGA 160881
|| | || | | |||| ||| || || | || || | |||||||| || ||||
Sbjct 119954 AAAAAGATTCTGGAGACTTTTTGTCAACATGAATACAGTAAAAATTCTGAGGGGCATAGA 120013
Query 160882 TGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTA 160941
| | || || | || || | |||||| || || |||| | ||| || ||||| || |
Sbjct 120014 TTGATCTTAGAAGTCTGTCAAGCATCTCAATTTTGTGATAAACCACTATTGAGTACGCAA 120073
Query 160942 TCGGAAACTC 160951
| ||||| ||
Sbjct 120074 TTGGAAATTC 120083
>seq59352
Length=547
Score = 95.1 bits (104), Expect = 1e-14
Identities = 120/165 (73%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 160223 GTCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTC 160282
|||||| || |||||||||||| || | | || | || | |||||| ||| ||
Sbjct 53 GTCACCCTCCAGGTACTGCCACTTGACCAGGCGGGGCAGGGCGTTCATGTCCGAGAGGTG 112
Query 160283 GTATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCA 160342
| | |||| | |||| ||||| || || ||||| ||||| || | |||||||||||
Sbjct 113 GAACTTGTCGTTGGGGGGCACGGCGCCCGGCACGCCAGGCATGCGATTGAGGGTGGCCCA 172
Query 160343 CAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAA 160387
| ||| ||||| |||||||| |||||||| | ||| || | |||
Sbjct 173 GACGTGCTCGTCAGGGCTGTAGGTGTCCTTGGCCCACTCGAGGAA 217
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 576770000803320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |