Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020
14-06-25] 62,257 sequences; 1,065,782,791 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq35559 86.0 7e-12
seq1566 82.4 9e-11
>seq35559
Length=19442
Score = 86.0 bits (94), Expect = 7e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 65441 AGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTGAGA 65500
||||||| |||||||| ||||||||||| || || || |||||||||||||||||||
Sbjct 4118 AGAATCCTTTTGACTTCATGGAAAACATCTCTCTGGAAGGCAAGACCAACTTCTTTGAGA 4177
Query 65501 AGCGAGTTGGGGACTAT 65517
||||||| || || |||
Sbjct 4178 AGCGAGTAGGTGAATAT 4194
>seq1566
Length=12574
Score = 82.4 bits (90), Expect = 9e-11
Identities = 110/153 (72%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937
||| | ||||| | | || ||||||||||| || ||||| || ||| | ||||||||
Sbjct 3044 TGGTACGCTATCATTGAGTCGCAGACGGAGACCGGCACACCCTACATGGTCTACAAGGAC 2985
Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997
| || ||| ||||| ||||| |||| |||| || || || || ||||| |||
Sbjct 2984 TCCTGCAACCGCAAGAGCAACCAGCAGAACCTGGGGACCATTAAATGCAGCAATCTATGC 2925
Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAG 76030
|| ||||| | |||||||| |||||||||
Sbjct 2924 ACTGAAATCGTGGAGTACACCAGCAAGGATGAG 2892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596105342080160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |