Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Buceros_20rhinoceros_20silvestris_20[refseq_20GCF_5F000710305.1_2020
14-06-25] 62,257 sequences; 1,065,782,791 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq27582 95.1 2e-14
>seq27582
Length=3938
Score = 95.1 bits (104), Expect = 2e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| |||||||| | || || || || |||| || | ||| || || || ||||||
Sbjct 2563 ATGCCACCTCTGAGACGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCG 2622
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | | ||| || | || || || ||||| || | ||||| |||||||||
Sbjct 2623 GACAGGGTACGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGA 2682
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || || || || |||| || | ||| || || || | ||||
Sbjct 2683 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCA 2742
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| ||||| ||||| || || || || || || ||||| || |||||
Sbjct 2743 ACTTCCAGAGTGATAGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 2792
Score = 91.5 bits (100), Expect = 3e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| |||||||| | || || |||| |||| || | ||| || ||| || ||||||
Sbjct 3019 ATGCCACCTCTGAGACGCAGCACCAAGTGCAGCGTGGACTCCTTCTGAATGTTGTAGTCG 3078
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | || || | || || || ||||| || | ||||| |||||||||
Sbjct 3079 GACAGAGTGCGTCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGA 3138
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || || || || |||| || | ||| || || || | ||||
Sbjct 3139 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCA 3198
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| ||||| ||||| || || || || || || ||||| || |||||
Sbjct 3199 ACTTCCAGAGTGATAGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 3248
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 898954277700240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |